faskowit / app-multiAtlasTT

brainlife.io version of maTT
MIT License
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No need to module load freesurfer #17

Open soichih opened 3 years ago

soichih commented 3 years ago

This App is failing with this error message on some resources (like shared bigred3)

+ module load freesurfer
++ /opt/cray/pe/modules/3.2.11.4/bin/modulecmd bash load freesurfer
ModuleCmd_Load.c(244):ERROR:105: Unable to locate a modulefile for 'freesurfer'

https://github.com/faskowit/app-multiAtlasTT/blob/468a62fb788c5c28a76d241065a7bbfa09abca7c/main#L36

This App is using freesurfer that comes with docker container, so I don't think we need to module load freesurfer, right?