Closed jnareb closed 3 years ago
I find this when I run nbdev_build_docs as a command or by nbdev.export2html.nbdev_build_docs().
I see that there is an apparent typo in nbdev_exporter,
exporter.template_path.append(str(Path(__file__).parent/'templates'))
where that should be template_paths.
However, that has been forever, and it only just showed up for me. Fixing it then creates an error "TemplateNotFound: markdown.tpl"
I don't know if it is related, but, before this started happening, nbdev_build_docs was not reliably updating the html files, I was starting to try to understand the workings of nbdev_export2html, but this has me really stuck.
@jnareb I'm not able to reproduce this error, even on a windows machine. If you happen to be familiar with Docker, Im curious if this works:
first pull the latest version of nbdev locally, and from the root of the repo, in your terminal run:
docker-compose up
(wait until the containers are up and running)
followed by
docker-compose exec notebook bash
followed by
nbdev_build_docs
What happens if you do that?
I suspect this is some bad interaction between packages, as nbdev_build_docs
worked without problems before the update.
Below there is full description of my current environment (taken from JupyterLab bug report template). For the time being I would be using https://gitpod.io to build docs; I'll try to examine this issue in more detail soon.
$ jupyter troubleshoot $PATH: C:\ProgramData\Anaconda3 C:\ProgramData\Anaconda3\Library\mingw-w64\bin C:\ProgramData\Anaconda3\Library\usr\bin C:\ProgramData\Anaconda3\Library\bin C:\ProgramData\Anaconda3\Scripts C:\ProgramData\Anaconda3\bin C:\ProgramData\Anaconda3\condabin [...] sys.path: C:\ProgramData\Anaconda3\Scripts C:\ProgramData\Anaconda3\python38.zip C:\ProgramData\Anaconda3\DLLs C:\ProgramData\Anaconda3\lib C:\ProgramData\Anaconda3 C:\Users\jnare\AppData\Roaming\Python\Python38\site-packages C:\ProgramData\Anaconda3\lib\site-packages C:\ProgramData\Anaconda3\lib\site-packages\win32 C:\ProgramData\Anaconda3\lib\site-packages\win32\lib C:\ProgramData\Anaconda3\lib\site-packages\Pythonwin sys.executable: C:\ProgramData\Anaconda3\python.exe sys.version: 3.8.5 (default, Sep 3 2020, 21:29:08) [MSC v.1916 64 bit (AMD64)] platform.platform(): Windows-10-10.0.18362-SP0 where jupyter: C:\ProgramData\Anaconda3\Scripts\jupyter.exe pip list: Package Version ---------------------------------- ------------------- -otebook 6.1.4 -ytz 2020.1 alabaster 0.7.12 anaconda-client 1.7.2 anaconda-navigator 1.10.0 anaconda-project 0.8.3 argh 0.26.2 argon2-cffi 20.1.0 asn1crypto 1.4.0 astroid 2.4.2 astropy 4.0.2 async-generator 1.10 atomicwrites 1.4.0 attrs 20.3.0 autopep8 1.5.4 Babel 2.8.1 backcall 0.2.0 backports.functools-lru-cache 1.6.1 backports.shutil-get-terminal-size 1.0.0 backports.tempfile 1.0 backports.weakref 1.0.post1 bcrypt 3.2.0 beautifulsoup4 4.9.3 bitarray 1.6.1 bkcharts 0.2 bleach 3.2.1 bokeh 2.2.3 boto 2.49.0 Bottleneck 1.3.2 brotlipy 0.7.0 certifi 2020.11.8 cffi 1.14.3 chardet 3.0.4 click 7.1.2 cloudpickle 1.6.0 clyent 1.2.2 colorama 0.4.4 comtypes 1.1.7 conda 4.9.2 conda-build 3.20.5 conda-package-handling 1.7.2 conda-verify 3.4.2 contextlib2 0.6.0.post1 cryptography 3.2.1 cycler 0.10.0 Cython 0.29.21 cytoolz 0.11.0 dask 2.30.0 decorator 4.4.2 defusedxml 0.6.0 diff-match-patch 20200713 distributed 2.30.1 Django 2.2.4 django-cors-headers 3.1.0 django-extensions 3.0.5 django-service-objects 0.5.0 djangorestframework 3.10.2 djangorestframework-jwt 1.10.0 docutils 0.16 drf-generators 0.5.0 entrypoints 0.3 et-xmlfile 1.0.1 fastcache 1.1.0 fastcore 1.3.9 filelock 3.0.12 flake8 3.8.4 Flask 1.1.2 fsspec 0.8.3 future 0.18.2 gevent 20.9.0 gitdb 4.0.5 GitPython 3.1.11 glob2 0.7 gmpy2 2.0.8 GPUtil 1.4.0 greenlet 0.4.17 h5py 2.10.0 HeapDict 1.0.1 html5lib 1.1 humanize 3.1.0 idna 2.10 imageio 2.9.0 imagesize 1.2.0 importlib-metadata 2.0.0 iniconfig 1.1.1 intervaltree 3.1.0 ipykernel 5.3.4 ipython 7.19.0 ipython-genutils 0.2.0 ipywidgets 7.5.1 isort 5.6.4 itsdangerous 1.1.0 jdcal 1.4.1 jedi 0.17.1 Jinja2 2.11.2 joblib 0.17.0 json5 0.9.5 jsonschema 3.2.0 jupyter 1.0.0 jupyter-client 6.1.7 jupyter-console 6.2.0 jupyter-contrib-core 0.3.3 jupyter-contrib-nbextensions 0.5.1 jupyter-core 4.7.0 jupyter-highlight-selected-word 0.2.0 jupyter-latex-envs 1.4.6 jupyter-nbextensions-configurator 0.4.1 jupyterlab 2.2.6 jupyterlab-git 0.23.2 jupyterlab-pygments 0.1.2 jupyterlab-server 1.2.0 keyring 21.4.0 kiwisolver 1.3.0 lazy-object-proxy 1.4.3 libarchive-c 2.9 llvmlite 0.34.0 locket 0.2.0 lxml 4.6.1 MarkupSafe 1.1.1 matplotlib 3.3.2 mccabe 0.6.1 menuinst 1.4.16 mistune 0.8.4 mkl-fft 1.2.0 mkl-random 1.1.1 mkl-service 2.3.0 mock 4.0.2 more-itertools 8.6.0 mpmath 1.1.0 msgpack 1.0.0 multipledispatch 0.6.0 navigator-updater 0.2.1 nbclient 0.5.1 nbconvert 6.0.7 nbd-colab 0.0.10 nbdev 1.1.5 nbdime 2.1.0 nbformat 5.0.8 nest-asyncio 1.4.3 networkx 2.5 nltk 3.5 nose 1.3.7 notebook 6.1.4 numba 0.51.2 numexpr 2.7.1 numpy 1.19.2 numpydoc 1.1.0 olefile 0.46 openpyxl 3.0.5 packaging 20.4 pandas 1.1.3 pandocfilters 1.4.3 paramiko 2.7.2 parso 0.7.0 partd 1.1.0 path 15.0.0 pathlib2 2.3.5 pathtools 0.1.2 patsy 0.5.1 pep8 1.7.1 pexpect 4.8.0 pickleshare 0.7.5 Pillow 8.0.1 pip 20.2.4 pkginfo 1.6.1 pluggy 0.13.1 ply 3.11 prometheus-client 0.8.0 prompt-toolkit 3.0.8 psutil 5.7.2 psycopg2 2.8.3 ptyprocess 0.6.0 py 1.9.0 pycodestyle 2.6.0 pycosat 0.6.3 pycparser 2.20 pycurl 7.43.0.6 pydocstyle 5.1.1 pydot 1.4.1 pyflakes 2.2.0 Pygments 2.7.2 PyJWT 1.7.1 pylint 2.6.0 PyNaCl 1.4.0 pyodbc 4.0.0-unsupported pyOpenSSL 19.1.0 pyparsing 2.4.7 pyreadline 2.1 pyrsistent 0.17.3 PySocks 1.7.1 pytest 0.0.0 python-dateutil 2.8.1 python-jsonrpc-server 0.4.0 python-language-server 0.35.1 pytz 2019.2 PyWavelets 1.1.1 pywin32 227 pywin32-ctypes 0.2.0 pywinpty 0.5.7 PyYAML 5.3.1 pyzmq 19.0.2 QDarkStyle 2.8.1 QtAwesome 1.0.1 qtconsole 4.7.7 QtPy 1.9.0 regex 2020.10.15 requests 2.24.0 rope 0.18.0 Rtree 0.9.4 ruamel-yaml 0.15.87 scikit-image 0.17.2 scikit-learn 0.23.2 scipy 1.5.2 seaborn 0.11.0 Send2Trash 1.5.0 setuptools 50.3.1.post20201107 simplegeneric 0.8.1 singledispatch 3.4.0.3 sip 4.19.13 six 1.13.0 smmap 3.0.4 snowballstemmer 2.0.0 sortedcollections 1.2.1 sortedcontainers 2.2.2 soupsieve 2.0.1 Sphinx 3.2.1 sphinxcontrib-applehelp 1.0.2 sphinxcontrib-devhelp 1.0.2 sphinxcontrib-htmlhelp 1.0.3 sphinxcontrib-jsmath 1.0.1 sphinxcontrib-qthelp 1.0.3 sphinxcontrib-serializinghtml 1.1.4 sphinxcontrib-websupport 1.2.4 spyder 4.1.5 spyder-kernels 1.9.4 SQLAlchemy 1.3.20 sqlparse 0.3.0 statsmodels 0.12.0 sympy 1.6.2 tables 3.6.1 tblib 1.7.0 terminado 0.9.1 testpath 0.4.4 threadpoolctl 2.1.0 tifffile 2020.10.1 toml 0.10.1 toolz 0.11.1 tornado 6.0.4 tqdm 4.51.0 traitlets 5.0.5 typing-extensions 3.7.4.3 ujson 4.0.1 unicodecsv 0.14.1 urllib3 1.25.11 watchdog 0.10.3 wcwidth 0.2.5 webencodings 0.5.1 Werkzeug 1.0.1 wheel 0.35.1 widgetsnbextension 3.5.1 win-inet-pton 1.1.0 win-unicode-console 0.5 wincertstore 0.2 wrapt 1.11.2 xlrd 1.2.0 XlsxWriter 1.3.7 xlwings 0.20.8 xlwt 1.3.0 xmltodict 0.12.0 yapf 0.30.0 zict 2.0.0 zipp 3.4.0 zope.event 4.5.0 zope.interface 5.1.2 conda list: # packages in environment at C:\ProgramData\Anaconda3: # # Name Version Build Channel _anaconda_depends 2020.07 py38_0 _ipyw_jlab_nb_ext_conf 0.1.0 py38_0 alabaster 0.7.12 py_0 anaconda custom py38_1 anaconda-client 1.7.2 py38_0 anaconda-navigator 1.10.0 py38_0 anaconda-project 0.8.4 py_0 argh 0.26.2 py38_0 argon2-cffi 20.1.0 py38he774522_1 asn1crypto 1.4.0 py_0 astroid 2.4.2 py38_0 astropy 4.0.2 py38he774522_0 async_generator 1.10 py_0 atomicwrites 1.4.0 py_0 attrs 20.3.0 pyhd3eb1b0_0 autopep8 1.5.4 py_0 babel 2.8.1 pyhd3eb1b0_0 backcall 0.2.0 py_0 backports 1.0 pyhd3eb1b0_2 backports.functools_lru_cache 1.6.1 pyhd3eb1b0_0 backports.shutil_get_terminal_size 1.0.0 py38_2 backports.tempfile 1.0 py_1 backports.weakref 1.0.post1 py_1 bcrypt 3.2.0 py38he774522_0 beautifulsoup4 4.9.3 pyhb0f4dca_0 bitarray 1.6.1 py38h2bbff1b_0 bkcharts 0.2 py38_0 blas 1.0 mkl bleach 3.2.1 py_0 blosc 1.20.1 h7bd577a_0 bokeh 2.2.3 py38_0 boto 2.49.0 py38_0 bottleneck 1.3.2 py38h2a96729_1 brotlipy 0.7.0 py38h2bbff1b_1003 bzip2 1.0.8 he774522_0 ca-certificates 2020.11.8 h5b45459_0 conda-forge certifi 2020.11.8 py38haa244fe_0 conda-forge cffi 1.14.3 py38hcd4344a_2 chardet 3.0.4 py38haa95532_1003 click 7.1.2 py_0 cloudpickle 1.6.0 py_0 clyent 1.2.2 py38_1 colorama 0.4.4 py_0 comtypes 1.1.7 py38_1001 conda 4.9.2 py38haa244fe_0 conda-forge conda-build 3.20.5 py38_1 conda-env 2.6.0 1 conda-package-handling 1.7.2 py38h76e460a_0 conda-verify 3.4.2 py_1 console_shortcut 0.1.1 4 contextlib2 0.6.0.post1 py_0 cryptography 3.2.1 py38hcd4344a_1 curl 7.71.1 h2a8f88b_1 cycler 0.10.0 py38_0 cython 0.29.21 py38hd77b12b_0 cytoolz 0.11.0 py38he774522_0 dask 2.30.0 py_0 dask-core 2.30.0 py_0 decorator 4.4.2 py_0 defusedxml 0.6.0 py_0 diff-match-patch 20200713 py_0 distributed 2.30.1 py38haa95532_0 docutils 0.16 py38_1 entrypoints 0.3 py38_0 et_xmlfile 1.0.1 py_1001 fastcache 1.1.0 py38he774522_0 fastcore 1.3.9 pypi_0 pypi filelock 3.0.12 py_0 flake8 3.8.4 py_0 flask 1.1.2 py_0 freetype 2.10.4 hd328e21_0 fsspec 0.8.3 py_0 future 0.18.2 py38_1 get_terminal_size 1.0.0 h38e98db_0 gevent 20.9.0 py38he774522_0 gitdb 4.0.5 py_0 conda-forge gitpython 3.1.11 py_0 conda-forge glob2 0.7 py_0 gmpy2 2.0.8 py38h7edee0f_3 gputil 1.4.0 pypi_0 pypi graphviz 2.38 hfd603c8_2 greenlet 0.4.17 py38he774522_0 h5py 2.10.0 py38h5e291fa_0 hdf5 1.10.4 h7ebc959_0 heapdict 1.0.1 py_0 html5lib 1.1 py_0 humanize 3.1.0 pypi_0 pypi icc_rt 2019.0.0 h0cc432a_1 icu 58.2 ha925a31_3 idna 2.10 py_0 imageio 2.9.0 py_0 imagesize 1.2.0 py_0 importlib-metadata 2.0.0 py_1 importlib_metadata 2.0.0 1 iniconfig 1.1.1 py_0 intel-openmp 2020.2 254 intervaltree 3.1.0 py_0 ipykernel 5.3.4 py38h5ca1d4c_0 ipython 7.19.0 py38hd4e2768_0 ipython_genutils 0.2.0 py38_0 ipywidgets 7.5.1 py_1 isort 5.6.4 py_0 itsdangerous 1.1.0 py_0 jdcal 1.4.1 py_0 jedi 0.17.1 py38_0 jinja2 2.11.2 py_0 joblib 0.17.0 py_0 jpeg 9b hb83a4c4_2 json5 0.9.5 py_0 jsonschema 3.2.0 py_2 jupyter 1.0.0 py38_7 jupyter_client 6.1.7 py_0 jupyter_console 6.2.0 py_0 jupyter_contrib_core 0.3.3 py_2 conda-forge jupyter_contrib_nbextensions 0.5.1 py38h32f6830_1 conda-forge jupyter_core 4.7.0 py38haa95532_0 jupyter_highlight_selected_word 0.2.0 py38h32f6830_1002 conda-forge jupyter_latex_envs 1.4.6 py38h32f6830_1001 conda-forge jupyter_nbextensions_configurator 0.4.1 py38h32f6830_2 conda-forge jupyterlab 2.2.6 py_0 jupyterlab-git 0.23.2 pyhd8ed1ab_0 conda-forge jupyterlab_pygments 0.1.2 py_0 jupyterlab_server 1.2.0 py_0 keyring 21.4.0 py38_1 kiwisolver 1.3.0 py38hd77b12b_0 krb5 1.18.2 hc04afaa_0 lazy-object-proxy 1.4.3 py38he774522_0 libarchive 3.4.2 h5e25573_0 libcurl 7.71.1 h2a8f88b_1 libiconv 1.15 h1df5818_7 liblief 0.10.1 ha925a31_0 libllvm9 9.0.1 h21ff451_0 libpng 1.6.37 h2a8f88b_0 libsodium 1.0.18 h62dcd97_0 libspatialindex 1.9.3 h33f27b4_0 libssh2 1.9.0 h7a1dbc1_1 libtiff 4.1.0 h56a325e_1 libxml2 2.9.10 hb89e7f3_3 libxslt 1.1.34 he774522_0 llvmlite 0.34.0 py38h1a82afc_4 locket 0.2.0 py38_1 lxml 4.6.1 py38h1350720_0 lz4-c 1.9.2 hf4a77e7_3 lzo 2.10 he774522_2 m2w64-gcc-libgfortran 5.3.0 6 m2w64-gcc-libs 5.3.0 7 m2w64-gcc-libs-core 5.3.0 7 m2w64-gmp 6.1.0 2 m2w64-libwinpthread-git 5.0.0.4634.697f757 2 markupsafe 1.1.1 py38he774522_0 matplotlib 3.3.2 0 matplotlib-base 3.3.2 py38hba9282a_0 mccabe 0.6.1 py38_1 menuinst 1.4.16 py38he774522_1 mistune 0.8.4 py38he774522_1000 mkl 2020.2 256 mkl-service 2.3.0 py38h2bbff1b_0 mkl_fft 1.2.0 py38h45dec08_0 mkl_random 1.1.1 py38h47e9c7a_0 mock 4.0.2 py_0 more-itertools 8.6.0 pyhd3eb1b0_0 mpc 1.1.0 h7edee0f_1 mpfr 4.0.2 h62dcd97_1 mpir 3.0.0 hec2e145_1 mpmath 1.1.0 py38_0 msgpack-python 1.0.0 py38h74a9793_1 msys2-conda-epoch 20160418 1 multipledispatch 0.6.0 py38_0 navigator-updater 0.2.1 py38_0 nbclient 0.5.1 py_0 nbconvert 6.0.7 py38_0 nbd-colab 0.0.10 pypi_0 pypi nbdev 1.1.5 pypi_0 pypi nbdime 2.1.0 py_0 conda-forge nbformat 5.0.8 py_0 nest-asyncio 1.4.3 pyhd3eb1b0_0 networkx 2.5 py_0 nltk 3.5 py_0 nodejs 15.3.0 h57928b3_0 conda-forge nose 1.3.7 py38_2 notebook 6.1.4 pypi_0 pypi numba 0.51.2 py38hf9181ef_1 numexpr 2.7.1 py38h25d0782_0 numpy 1.19.2 py38hadc3359_0 numpy-base 1.19.2 py38ha3acd2a_0 numpydoc 1.1.0 pyhd3eb1b0_1 olefile 0.46 py_0 openpyxl 3.0.5 py_0 openssl 1.1.1h he774522_0 conda-forge packaging 20.4 py_0 pandas 1.1.3 py38ha925a31_0 pandoc 2.11 h9490d1a_0 pandocfilters 1.4.3 py38haa95532_1 paramiko 2.7.2 py_0 parso 0.7.0 py_0 partd 1.1.0 py_0 path 15.0.0 py38_0 path.py 12.5.0 0 pathlib2 2.3.5 py38_0 pathtools 0.1.2 py_1 patsy 0.5.1 py38_0 pep8 1.7.1 py38_0 pexpect 4.8.0 pyhd3eb1b0_3 pickleshare 0.7.5 py38_1000 pillow 8.0.1 py38h4fa10fc_0 pip 20.2.4 py38haa95532_0 pkginfo 1.6.1 py38haa95532_0 pluggy 0.13.1 py38_0 ply 3.11 py38_0 powershell_shortcut 0.0.1 3 prometheus_client 0.8.0 py_0 prompt-toolkit 3.0.8 py_0 prompt_toolkit 3.0.8 0 psutil 5.7.2 py38he774522_0 ptyprocess 0.6.0 pyhd3eb1b0_2 py 1.9.0 py_0 py-lief 0.10.1 py38ha925a31_0 pycodestyle 2.6.0 py_0 pycosat 0.6.3 py38h2bbff1b_0 pycparser 2.20 py_2 pycurl 7.43.0.6 py38h7a1dbc1_0 pydocstyle 5.1.1 py_0 pydot 1.4.1 py38_0 pyflakes 2.2.0 py_0 pygments 2.7.2 pyhd3eb1b0_0 pylint 2.6.0 py38_0 pynacl 1.4.0 py38h62dcd97_1 pyodbc 4.0.30 py38ha925a31_0 pyopenssl 19.1.0 pyhd3eb1b0_1 pyparsing 2.4.7 py_0 pyqt 5.9.2 py38ha925a31_4 pyreadline 2.1 py38_1 pyrsistent 0.17.3 py38he774522_0 pysocks 1.7.1 py38haa95532_0 pytables 3.6.1 py38ha5be198_0 pytest 6.1.1 py38_0 python 3.8.5 h5fd99cc_1 python-dateutil 2.8.1 py_0 python-jsonrpc-server 0.4.0 py_0 python-language-server 0.35.1 py_0 python-libarchive-c 2.9 py_0 python_abi 3.8 1_cp38 conda-forge pytz 2020.1 pypi_0 pypi pywavelets 1.1.1 py38he774522_2 pywin32 227 py38he774522_1 pywin32-ctypes 0.2.0 py38_1000 pywinpty 0.5.7 py38_0 pyyaml 5.3.1 py38he774522_1 pyzmq 19.0.2 py38ha925a31_1 qdarkstyle 2.8.1 py_0 qt 5.9.7 vc14h73c81de_0 qtawesome 1.0.1 py_0 qtconsole 4.7.7 py_0 qtpy 1.9.0 py_0 regex 2020.10.15 py38he774522_0 requests 2.24.0 py_0 rope 0.18.0 py_0 rtree 0.9.4 py38h21ff451_1 ruamel_yaml 0.15.87 py38he774522_1 scikit-image 0.17.2 py38h1e1f486_0 scikit-learn 0.23.2 py38h47e9c7a_0 scipy 1.5.2 py38h14eb087_0 seaborn 0.11.0 py_0 send2trash 1.5.0 py38_0 setuptools 50.3.1 py38haa95532_1 simplegeneric 0.8.1 py38_2 singledispatch 3.4.0.3 py_1001 sip 4.19.13 py38ha925a31_0 six 1.15.0 py38haa95532_0 smmap 3.0.4 pyh9f0ad1d_0 conda-forge snappy 1.1.8 h33f27b4_0 snowballstemmer 2.0.0 py_0 sortedcollections 1.2.1 py_0 sortedcontainers 2.2.2 py_0 soupsieve 2.0.1 py_0 sphinx 3.2.1 py_0 sphinxcontrib 1.0 py38_1 sphinxcontrib-applehelp 1.0.2 py_0 sphinxcontrib-devhelp 1.0.2 py_0 sphinxcontrib-htmlhelp 1.0.3 py_0 sphinxcontrib-jsmath 1.0.1 py_0 sphinxcontrib-qthelp 1.0.3 py_0 sphinxcontrib-serializinghtml 1.1.4 py_0 sphinxcontrib-websupport 1.2.4 py_0 spyder 4.1.5 py38_0 spyder-kernels 1.9.4 py38_0 sqlalchemy 1.3.20 py38h2bbff1b_0 sqlite 3.33.0 h2a8f88b_0 statsmodels 0.12.0 py38he774522_0 sympy 1.6.2 py38haa95532_1 tbb 2020.3 h74a9793_0 tblib 1.7.0 py_0 terminado 0.9.1 py38_0 testpath 0.4.4 py_0 threadpoolctl 2.1.0 pyh5ca1d4c_0 tifffile 2020.10.1 py38h8c2d366_2 tk 8.6.10 he774522_0 toml 0.10.1 py_0 toolz 0.11.1 py_0 tornado 6.0.4 py38he774522_1 tqdm 4.51.0 pyhd3eb1b0_0 traitlets 5.0.5 py_0 typing_extensions 3.7.4.3 py_0 ujson 4.0.1 py38ha925a31_0 unicodecsv 0.14.1 py38_0 urllib3 1.25.11 py_0 vc 14.1 h0510ff6_4 vs2015_runtime 14.16.27012 hf0eaf9b_3 watchdog 0.10.3 py38_0 wcwidth 0.2.5 py_0 webencodings 0.5.1 py38_1 werkzeug 1.0.1 py_0 wheel 0.35.1 pyhd3eb1b0_0 widgetsnbextension 3.5.1 py38_0 win_inet_pton 1.1.0 py38haa95532_0 win_unicode_console 0.5 py38_0 wincertstore 0.2 py38_0 winpty 0.4.3 4 wrapt 1.11.2 py38he774522_0 xlrd 1.2.0 py_0 xlsxwriter 1.3.7 py_0 xlwings 0.20.8 py38_0 xlwt 1.3.0 py38_0 xmltodict 0.12.0 py_0 xz 5.2.5 h62dcd97_0 yaml 0.2.5 he774522_0 yapf 0.30.0 py_0 zeromq 4.3.2 ha925a31_3 zict 2.0.0 py_0 zipp 3.4.0 pyhd3eb1b0_0 zlib 1.2.11 h62dcd97_4 zope 1.0 py38_1 zope.event 4.5.0 py38_0 zope.interface 5.1.2 py38he774522_0 zstd 1.4.5 h04227a9_0 conda env: name: base channels: - conda-forge - defaults dependencies: - _anaconda_depends=2020.07=py38_0 - _ipyw_jlab_nb_ext_conf=0.1.0=py38_0 - alabaster=0.7.12=py_0 - anaconda=custom=py38_1 - anaconda-client=1.7.2=py38_0 - anaconda-navigator=1.10.0=py38_0 - anaconda-project=0.8.4=py_0 - argh=0.26.2=py38_0 - argon2-cffi=20.1.0=py38he774522_1 - asn1crypto=1.4.0=py_0 - astroid=2.4.2=py38_0 - astropy=4.0.2=py38he774522_0 - async_generator=1.10=py_0 - atomicwrites=1.4.0=py_0 - attrs=20.3.0=pyhd3eb1b0_0 - autopep8=1.5.4=py_0 - babel=2.8.1=pyhd3eb1b0_0 - backcall=0.2.0=py_0 - backports=1.0=pyhd3eb1b0_2 - backports.functools_lru_cache=1.6.1=pyhd3eb1b0_0 - backports.shutil_get_terminal_size=1.0.0=py38_2 - backports.tempfile=1.0=py_1 - backports.weakref=1.0.post1=py_1 - bcrypt=3.2.0=py38he774522_0 - beautifulsoup4=4.9.3=pyhb0f4dca_0 - bitarray=1.6.1=py38h2bbff1b_0 - bkcharts=0.2=py38_0 - blas=1.0=mkl - bleach=3.2.1=py_0 - blosc=1.20.1=h7bd577a_0 - bokeh=2.2.3=py38_0 - boto=2.49.0=py38_0 - bottleneck=1.3.2=py38h2a96729_1 - brotlipy=0.7.0=py38h2bbff1b_1003 - bzip2=1.0.8=he774522_0 - ca-certificates=2020.11.8=h5b45459_0 - certifi=2020.11.8=py38haa244fe_0 - cffi=1.14.3=py38hcd4344a_2 - chardet=3.0.4=py38haa95532_1003 - click=7.1.2=py_0 - cloudpickle=1.6.0=py_0 - clyent=1.2.2=py38_1 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greenlet=0.4.17=py38he774522_0 - h5py=2.10.0=py38h5e291fa_0 - hdf5=1.10.4=h7ebc959_0 - heapdict=1.0.1=py_0 - html5lib=1.1=py_0 - icc_rt=2019.0.0=h0cc432a_1 - icu=58.2=ha925a31_3 - idna=2.10=py_0 - imageio=2.9.0=py_0 - imagesize=1.2.0=py_0 - importlib-metadata=2.0.0=py_1 - importlib_metadata=2.0.0=1 - iniconfig=1.1.1=py_0 - intel-openmp=2020.2=254 - intervaltree=3.1.0=py_0 - ipykernel=5.3.4=py38h5ca1d4c_0 - ipython=7.19.0=py38hd4e2768_0 - ipython_genutils=0.2.0=py38_0 - ipywidgets=7.5.1=py_1 - isort=5.6.4=py_0 - itsdangerous=1.1.0=py_0 - jdcal=1.4.1=py_0 - jedi=0.17.1=py38_0 - jinja2=2.11.2=py_0 - joblib=0.17.0=py_0 - jpeg=9b=hb83a4c4_2 - json5=0.9.5=py_0 - jsonschema=3.2.0=py_2 - jupyter=1.0.0=py38_7 - jupyter_client=6.1.7=py_0 - jupyter_console=6.2.0=py_0 - jupyter_contrib_core=0.3.3=py_2 - jupyter_contrib_nbextensions=0.5.1=py38h32f6830_1 - jupyter_core=4.7.0=py38haa95532_0 - jupyter_highlight_selected_word=0.2.0=py38h32f6830_1002 - jupyter_latex_envs=1.4.6=py38h32f6830_1001 - jupyter_nbextensions_configurator=0.4.1=py38h32f6830_2 - jupyterlab=2.2.6=py_0 - jupyterlab-git=0.23.2=pyhd8ed1ab_0 - jupyterlab_pygments=0.1.2=py_0 - jupyterlab_server=1.2.0=py_0 - keyring=21.4.0=py38_1 - kiwisolver=1.3.0=py38hd77b12b_0 - krb5=1.18.2=hc04afaa_0 - lazy-object-proxy=1.4.3=py38he774522_0 - libarchive=3.4.2=h5e25573_0 - libcurl=7.71.1=h2a8f88b_1 - libiconv=1.15=h1df5818_7 - liblief=0.10.1=ha925a31_0 - libllvm9=9.0.1=h21ff451_0 - libpng=1.6.37=h2a8f88b_0 - libsodium=1.0.18=h62dcd97_0 - libspatialindex=1.9.3=h33f27b4_0 - libssh2=1.9.0=h7a1dbc1_1 - libtiff=4.1.0=h56a325e_1 - libxml2=2.9.10=hb89e7f3_3 - libxslt=1.1.34=he774522_0 - llvmlite=0.34.0=py38h1a82afc_4 - locket=0.2.0=py38_1 - lxml=4.6.1=py38h1350720_0 - lz4-c=1.9.2=hf4a77e7_3 - lzo=2.10=he774522_2 - m2w64-gcc-libgfortran=5.3.0=6 - m2w64-gcc-libs=5.3.0=7 - m2w64-gcc-libs-core=5.3.0=7 - m2w64-gmp=6.1.0=2 - m2w64-libwinpthread-git=5.0.0.4634.697f757=2 - markupsafe=1.1.1=py38he774522_0 - matplotlib=3.3.2=0 - matplotlib-base=3.3.2=py38hba9282a_0 - mccabe=0.6.1=py38_1 - menuinst=1.4.16=py38he774522_1 - mistune=0.8.4=py38he774522_1000 - mkl=2020.2=256 - mkl-service=2.3.0=py38h2bbff1b_0 - mkl_fft=1.2.0=py38h45dec08_0 - mkl_random=1.1.1=py38h47e9c7a_0 - mock=4.0.2=py_0 - more-itertools=8.6.0=pyhd3eb1b0_0 - mpc=1.1.0=h7edee0f_1 - mpfr=4.0.2=h62dcd97_1 - mpir=3.0.0=hec2e145_1 - mpmath=1.1.0=py38_0 - msgpack-python=1.0.0=py38h74a9793_1 - msys2-conda-epoch=20160418=1 - multipledispatch=0.6.0=py38_0 - navigator-updater=0.2.1=py38_0 - nbclient=0.5.1=py_0 - nbconvert=6.0.7=py38_0 - nbdime=2.1.0=py_0 - nbformat=5.0.8=py_0 - nest-asyncio=1.4.3=pyhd3eb1b0_0 - networkx=2.5=py_0 - nltk=3.5=py_0 - nodejs=15.3.0=h57928b3_0 - nose=1.3.7=py38_2 - numba=0.51.2=py38hf9181ef_1 - numexpr=2.7.1=py38h25d0782_0 - numpy=1.19.2=py38hadc3359_0 - numpy-base=1.19.2=py38ha3acd2a_0 - numpydoc=1.1.0=pyhd3eb1b0_1 - olefile=0.46=py_0 - openpyxl=3.0.5=py_0 - openssl=1.1.1h=he774522_0 - packaging=20.4=py_0 - pandas=1.1.3=py38ha925a31_0 - pandoc=2.11=h9490d1a_0 - pandocfilters=1.4.3=py38haa95532_1 - paramiko=2.7.2=py_0 - parso=0.7.0=py_0 - partd=1.1.0=py_0 - path=15.0.0=py38_0 - path.py=12.5.0=0 - pathlib2=2.3.5=py38_0 - pathtools=0.1.2=py_1 - patsy=0.5.1=py38_0 - pep8=1.7.1=py38_0 - pexpect=4.8.0=pyhd3eb1b0_3 - pickleshare=0.7.5=py38_1000 - pillow=8.0.1=py38h4fa10fc_0 - pip=20.2.4=py38haa95532_0 - pkginfo=1.6.1=py38haa95532_0 - pluggy=0.13.1=py38_0 - ply=3.11=py38_0 - powershell_shortcut=0.0.1=3 - prometheus_client=0.8.0=py_0 - prompt-toolkit=3.0.8=py_0 - prompt_toolkit=3.0.8=0 - psutil=5.7.2=py38he774522_0 - ptyprocess=0.6.0=pyhd3eb1b0_2 - py=1.9.0=py_0 - py-lief=0.10.1=py38ha925a31_0 - pycodestyle=2.6.0=py_0 - pycosat=0.6.3=py38h2bbff1b_0 - pycparser=2.20=py_2 - pycurl=7.43.0.6=py38h7a1dbc1_0 - pydocstyle=5.1.1=py_0 - pydot=1.4.1=py38_0 - pyflakes=2.2.0=py_0 - pygments=2.7.2=pyhd3eb1b0_0 - pylint=2.6.0=py38_0 - pynacl=1.4.0=py38h62dcd97_1 - pyodbc=4.0.30=py38ha925a31_0 - pyopenssl=19.1.0=pyhd3eb1b0_1 - pyparsing=2.4.7=py_0 - pyqt=5.9.2=py38ha925a31_4 - pyreadline=2.1=py38_1 - pyrsistent=0.17.3=py38he774522_0 - pysocks=1.7.1=py38haa95532_0 - pytables=3.6.1=py38ha5be198_0 - pytest=6.1.1=py38_0 - python=3.8.5=h5fd99cc_1 - python-dateutil=2.8.1=py_0 - python-jsonrpc-server=0.4.0=py_0 - python-language-server=0.35.1=py_0 - python-libarchive-c=2.9=py_0 - python_abi=3.8=1_cp38 - pywavelets=1.1.1=py38he774522_2 - pywin32=227=py38he774522_1 - pywin32-ctypes=0.2.0=py38_1000 - pywinpty=0.5.7=py38_0 - pyyaml=5.3.1=py38he774522_1 - pyzmq=19.0.2=py38ha925a31_1 - qdarkstyle=2.8.1=py_0 - qt=5.9.7=vc14h73c81de_0 - qtawesome=1.0.1=py_0 - qtconsole=4.7.7=py_0 - qtpy=1.9.0=py_0 - regex=2020.10.15=py38he774522_0 - requests=2.24.0=py_0 - rope=0.18.0=py_0 - rtree=0.9.4=py38h21ff451_1 - ruamel_yaml=0.15.87=py38he774522_1 - scikit-image=0.17.2=py38h1e1f486_0 - scikit-learn=0.23.2=py38h47e9c7a_0 - scipy=1.5.2=py38h14eb087_0 - seaborn=0.11.0=py_0 - send2trash=1.5.0=py38_0 - setuptools=50.3.1=py38haa95532_1 - simplegeneric=0.8.1=py38_2 - singledispatch=3.4.0.3=py_1001 - sip=4.19.13=py38ha925a31_0 - six=1.15.0=py38haa95532_0 - smmap=3.0.4=pyh9f0ad1d_0 - snappy=1.1.8=h33f27b4_0 - snowballstemmer=2.0.0=py_0 - sortedcollections=1.2.1=py_0 - sortedcontainers=2.2.2=py_0 - soupsieve=2.0.1=py_0 - sphinx=3.2.1=py_0 - sphinxcontrib=1.0=py38_1 - sphinxcontrib-applehelp=1.0.2=py_0 - sphinxcontrib-devhelp=1.0.2=py_0 - sphinxcontrib-htmlhelp=1.0.3=py_0 - sphinxcontrib-jsmath=1.0.1=py_0 - sphinxcontrib-qthelp=1.0.3=py_0 - sphinxcontrib-serializinghtml=1.1.4=py_0 - sphinxcontrib-websupport=1.2.4=py_0 - spyder=4.1.5=py38_0 - spyder-kernels=1.9.4=py38_0 - sqlalchemy=1.3.20=py38h2bbff1b_0 - sqlite=3.33.0=h2a8f88b_0 - statsmodels=0.12.0=py38he774522_0 - sympy=1.6.2=py38haa95532_1 - tbb=2020.3=h74a9793_0 - tblib=1.7.0=py_0 - terminado=0.9.1=py38_0 - testpath=0.4.4=py_0 - threadpoolctl=2.1.0=pyh5ca1d4c_0 - tifffile=2020.10.1=py38h8c2d366_2 - tk=8.6.10=he774522_0 - toml=0.10.1=py_0 - toolz=0.11.1=py_0 - tornado=6.0.4=py38he774522_1 - tqdm=4.51.0=pyhd3eb1b0_0 - traitlets=5.0.5=py_0 - typing_extensions=3.7.4.3=py_0 - ujson=4.0.1=py38ha925a31_0 - unicodecsv=0.14.1=py38_0 - urllib3=1.25.11=py_0 - vc=14.1=h0510ff6_4 - vs2015_runtime=14.16.27012=hf0eaf9b_3 - watchdog=0.10.3=py38_0 - wcwidth=0.2.5=py_0 - webencodings=0.5.1=py38_1 - werkzeug=1.0.1=py_0 - wheel=0.35.1=pyhd3eb1b0_0 - widgetsnbextension=3.5.1=py38_0 - win_inet_pton=1.1.0=py38haa95532_0 - win_unicode_console=0.5=py38_0 - wincertstore=0.2=py38_0 - winpty=0.4.3=4 - wrapt=1.11.2=py38he774522_0 - xlrd=1.2.0=py_0 - xlsxwriter=1.3.7=py_0 - xlwings=0.20.8=py38_0 - xlwt=1.3.0=py38_0 - xmltodict=0.12.0=py_0 - xz=5.2.5=h62dcd97_0 - yaml=0.2.5=he774522_0 - yapf=0.30.0=py_0 - zeromq=4.3.2=ha925a31_3 - zict=2.0.0=py_0 - zipp=3.4.0=pyhd3eb1b0_0 - zlib=1.2.11=h62dcd97_4 - zope=1.0=py38_1 - zope.event=4.5.0=py38_0 - zope.interface=5.1.2=py38he774522_0 - zstd=1.4.5=h04227a9_0 - pip: - fastcore==1.3.9 - gputil==1.4.0 - humanize==3.1.0 - nbd-colab==0.0.10 - nbdev==1.1.5 - notebook==6.1.4 - pytz==2020.1 prefix: C:\ProgramData\Anaconda3
I get the same problem described by this issue on Ubuntu 18.04.
@hamelsmu I just ran nbdev_build_docs
in the docker container as you suggested, and it works there.
I think this has something to do with nbconvert
when I use pip to install nbdev (which uses nbconvert=5.6.1) everything works. However, when I use anaconda, which uses the latest version of nbconvert (6.x) I get a similar error.
@carlosrojas, I just checked and I am using nbconvert=5.6.1, and do get the error... so it's probably something else :(
Looks like template_path
got renamed to template_paths
in nbconvert >= 6.0.0
Okay, so I think I know what happened. nbdev
is not ready for nbconvert
:6+ https://github.com/fastai/nbdev/issues/249. The code is still there (https://github.com/fastai/nbdev/blob/master/settings.ini#L18) but somehow in the environment I am using, nbconvert
got upgraded to 6.0.7.
I uninstalled nbdev and installed it again (via pip uninstall nbdev
then pip install nbdev
) which appropriately downgraded the dependency:
I can confirm that reinstalling the nbdev
fixed the issue.
I can confirm that reinstalling the nbdev fixed the issue.
Thanks! Closing issue
Hi All,
Just wanted to state I had this issue as well. This isn't really a problem with NBDEV as it is anaconda. I'm not sure how anaconda determines dependencies but it is installing a far too new version of NBCONVERT. PIP does the right thing though. While not optimal for those trying to use Anaconda as the package manager.
Also same issue here. This basically forces me to pin nbconvert
to stay at 5.x for now, because any conda update --all
would upgrade it.
Pinning can be done in a conda env like so:
conda config --env --add pinned_packages nbconvert=5
and then your sources configs have this entry:
$ conda config --show-sources (py38)
==> /u/paige/maye/.condarc <==
channel_priority: strict
==> /luna4/maye/miniconda3/envs/py38/.condarc <==
pinned_packages:
- nbconvert=5
channels:
- conda-forge
After updating all packages in my programming environment (Anaconda), the
nbdev_build_docs
command (issued from terminal launched from Jupyter) stopped working. Among others the creatingREADME.md
fromindex.ipynb
fails with the following error:I have installed the following versions of libraries (
conda list
)Python 3.8.5
Windows 10 Home, version 1909, 64-bit