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federicacitarrella / FusionFlow

FusionFlow is a bioinformatic pipeline that enables the detection of gene fusions from RNA and DNA data.
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gdown error #28

Closed federicacitarrella closed 2 years ago

federicacitarrella commented 2 years ago

If you get a similar error:

Traceback (most recent call last):
  File "/home/citarrella/miniconda3/envs/prova/bin/gdown", line 10, in <module>
    sys.exit(main())
  File "/home/citarrella/miniconda3/envs/prova/lib/python3.10/site-packages/gdown/cli.py", line 99, in main
    filename = download(
  File "/home/citarrella/miniconda3/envs/prova/lib/python3.10/site-packages/gdown/download.py", line 97, in download
    cookies = json.load(f)
  File "/home/citarrella/miniconda3/envs/prova/lib/python3.10/json/__init__.py", line 293, in load
    return loads(fp.read(),
  File "/home/citarrella/miniconda3/envs/prova/lib/python3.10/json/__init__.py", line 346, in loads
    return _default_decoder.decode(s)
  File "/home/citarrella/miniconda3/envs/prova/lib/python3.10/json/decoder.py", line 337, in decode
    obj, end = self.raw_decode(s, idx=_w(s, 0).end())
  File "/home/citarrella/miniconda3/envs/prova/lib/python3.10/json/decoder.py", line 355, in raw_decode
    raise JSONDecodeError("Expecting value", s, err.value) from None
json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0)

Try the following command: rm -f ~/.cache/gdown/cookies.json