fgcz / rawDiag

Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package
https://bioconductor.org/packages/rawDiag
36 stars 11 forks source link

windows build and windows build testing #20

Closed cpanse closed 6 years ago

cpanse commented 6 years ago

Test case

Requirements

# System Requirements

pkgs <- c('ggplot2',
  'dplyr',
  'hexbin',
  'magrittr',
  'parallel',
  'RSQLite',
  'scales',
  'tidyr',
  'tidyverse')

pkgs <- pkgs[(!pkgs %in% unique(installed.packages()[,'Package']))]
if(length(pkgs) > 0){install.packages(pkgs)}

Install

install.packages('http://fgcz-ms.uzh.ch/~cpanse/rawDiag_0.0.3.tar.gz')

Testing

library(rawDiag)
(rawfile <- file.path(path.package(package = "rawDiag"), "extdata", 'sample.raw'))
system.time(RAW <- read.raw(file = rawfile))
summary.rawDiag(RAW)
cpanse commented 6 years ago

screen shot 2018-06-14 at 09 38 24

https://cran.r-project.org/bin/windows/base/rw-FAQ.html

do not install on a network drive!!!