search

fgcz / rawDiag

Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package
https://bioconductor.org/packages/rawDiag
36 stars 11 forks source link

data analysis task: MaxQuant evidence file for targeted XIC extraction #34

Open wolski opened 6 years ago

wolski commented 6 years ago

MQ bfabric workunit with combined course data: 175310

screen shot 2018-09-26 at 11 19 45

download zip than:

xx <- read.csv("paolo_20180716_o4526_MQ_txtFiles/evidence.txt",sep="\t")
xx %>% head()
# vielleicht brauchbare columns.
relevant <- xx %>% select(Raw.file,
Sequence,Modified.sequence,Proteins, Charge,MS.MS.m.z, m.z, Mass,
Retention.time, Retention.length,Score,Delta.score,MS.MS.scan.number,
Intensity, Type ) %>% head()
cpanse commented 5 years ago

@wolski it looks like as if this issue is in the wrong queue