fhcrc / deenurp

16S rRNA gene sequence curation and phylogenetic reference set creation
GNU General Public License v3.0
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Make multithreaded tasks use all cores by default #12

Closed cmccoy closed 10 years ago

cmccoy commented 10 years ago

Switch multithreaded sections of deenurp to use all available cores by default, as detected by

multiprocessing.cpu_count()

The old defaults varied by command.

@nhoffman, @crosenth: I also switched the default number of cores for cmalign to 1; the default was varying by command. If you're interested in adding something more powerful, that would be great.