rhino2 matsengrp/overcalled » sm --deduplicate-taxa vaginal-0.2.picks.fasta 2 ↵
Traceback (most recent call last):
File "/mnt/orca/home/phs_grp/matsengrp//local/bin/seqmagick", line 7, in <module>
sys.exit(cli.main(sys.argv[1:]))
File "/mnt/orca/home/phs_grp/matsengrp/python-local/lib/python2.7/site-packages/seqmagick/scripts/cli.py", line 29, in main
return action(arguments)
File "/mnt/orca/home/phs_grp/matsengrp/python-local/lib/python2.7/site-packages/seqmagick/subcommands/mogrify.py", line 38, in action
shutil.move(temp_name, input_file)
File "/home/matsengrp/local/encap/python-2.7.1/lib/python2.7/shutil.py", line 292, in move
copy2(src, real_dst)
File "/home/matsengrp/local/encap/python-2.7.1/lib/python2.7/shutil.py", line 128, in copy2
copystat(src, dst)
File "/home/matsengrp/local/encap/python-2.7.1/lib/python2.7/shutil.py", line 99, in copystat
os.chmod(dst, mode)
OSError: [Errno 1] Operation not permitted: 'vaginal-0.2.picks.fasta'