``taxit update_taxids`` ``--ignore-unknowns`` and ``--taxid-column``

fhcrc / taxtastic

Create and maintain phylogenetic "reference packages" of biological sequences.

GNU General Public License v3.0

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Closed crosenth closed 8 years ago

crosenth commented 8 years ago

For use when pre-updating parent_ids before taxit add_nodes.

crosenth commented 8 years ago

consider moving --append-lineage to separate subcommand for use after taxit add_nodes