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fhdsl / NIH_Data_Sharing

Learn about the new NIH data sharing policy, places where you might want to share your particular kind of data, and how to deal with possible challenges associated with the policy.
https://hutchdatascience.org/NIH_Data_Sharing/
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Hutch oriented Data Types #7

Closed vortexing closed 2 years ago

vortexing commented 2 years ago

The Data Types that might be good to organize some portion of this course by or present suggestions for that are most interesting to the Hutch like include:

  1. Genomics data: gene expression - GEO, Gtex, variant data (with - clinvar - or without - dbSNP - clinical connections, structural variations - dbVar, sequence data in general)
  2. Imaging data (likely not of human body parts during clinical care, but of things through microscopes or animal imaging). (??http://www.cellimagelibrary.org/pages/about ??)
  3. Flow cytometry data ??
  4. Proteomic data (PDC?)
  5. clinical trials data (clintrial.gov)
  6. medical imaging data?

Others for sure but these seem to be a start that include a couple of particularly easy and some hard examples.