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Baseline: Wrong transcript #17

Closed fhosking closed 6 months ago

fhosking commented 7 months ago

<html xmlns:v="urn:schemas-microsoft-com:vml" xmlns:o="urn:schemas-microsoft-com:office:office" xmlns:x="urn:schemas-microsoft-com:office:excel" xmlns="http://www.w3.org/TR/REC-html40">

Frontend label | Access Variable Label | Access Variable Name | REDCap variable name -- | -- | -- | -- Molecular Biology / BaselineData BCR-ABL 1 Transcript Type Type of transcript | Type of transcript | TypeOfTranscript | mol_typeoftranscript

REDCap is picking wrong transcript type (eg for patient 100 it should be e14a2 and REDCap is showing e13a2)

fhosking commented 6 months ago
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This is worth investigating. It certainly seems that the Type of transcript value for record 100 is '3'.

I can't find the encoding for these anywhere. For whatever reason the current encoding is:

1, e1a2 2, e14a2 3, e13a2 4, Unknown type 5, Other

afzalkhan500 commented 6 months ago

1, e1a2 2, e13a2 3, e14a2 4, Unknown Type 5, Other

fhosking commented 6 months ago

Updated

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