fiaisis / run-detection

The way we detect when our system for reduction should automatically perform a reduction and with what arguments we should do that.
GNU General Public License v3.0
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Bump the python-packages group across 1 directory with 7 updates #336

Closed dependabot[bot] closed 2 weeks ago

dependabot[bot] commented 3 weeks ago

Bumps the python-packages group with 7 updates in the / directory:

Package From To
h5py 3.11.0 3.12.1
xmltodict 0.13.0 0.14.2
ruff 0.4.8 0.7.2
mypy 1.10.0 1.13.0
types-requests 2.32.0.20240914 2.32.0.20241016
pytest 8.2.2 8.3.3
pytest-cov 5.0.0 6.0.0

Updates h5py from 3.11.0 to 3.12.1

Commits
  • c783fd1 Merge pull request #2509 from takluyver/rever-3.12.1
  • bf57057 Merge pull request #2508 from m-wrzr/doc-fix-broken-swmr-link
  • e600aa1 Add release note for 3.12.1
  • 7eb1fd0 bumped version to 3.12.1
  • c3511e2 Merge pull request #2507 from neutrinoceros/whl/hotfix_windows_wheels
  • 126d455 fix swmr documentation link
  • 41e5abe WHL: fix nightly builds [pip-pre]
  • b180820 WHL: fix missing dll in windows wheels
  • 1c0be29 Merge pull request #2504 from takluyver/rever-3.12
  • 3100379 Make it explicit that free-threading support is not ready
  • Additional commits viewable in compare view


Updates xmltodict from 0.13.0 to 0.14.2

Changelog

Sourced from xmltodict's changelog.

v0.14.2

  • Revert "Ensure significant whitespace is not trimmed"
    • This changed was backwards incompatible and caused downstream issues.

v0.14.1

v0.14.0

  • Drop old Python 2 support leftover code and apply several RUFF code health fixes.
  • Add Python 3.11, 3.12 and 3.13 support and tests.
  • Tests in gh-action.
  • Remove defusedexpat import.
  • Replace deprecated BadZipfile with BadZipFile.
  • Support indent using integer format, enable python -m unittest tests/*.py.
  • Ensure significant whitespace is not trimmed
  • added conda installation command
  • fix attributes not appearing in streaming mode
  • Fix Travis CI status badge URL
  • Update push_release.sh to use twine.
Commits
  • 0952f38 Bump version and update CHANGELOG.
  • 13068aa Revert "Ensure significant whitespace is not trimmed"
  • 34759c3 Bump version and update CHANGELOG.
  • e3f7161 Drop Python 3.4 and 3.5
  • cc54376 Fix misspellings found by codespell
  • 01cea1e Apply ruff/Pyflakes rule F841
  • 48b47c9 Bump version and update CHANGELOG.
  • 94ee05b Remove unnecessary whitespace.
  • efe6060 Merge branch 'DimitriPapadopoulos-pyupgrade'
  • 5b1b511 Get rid of Python 2 basestring and unicode (#346)
  • Additional commits viewable in compare view


Updates ruff from 0.4.8 to 0.7.2

Release notes

Sourced from ruff's releases.

0.7.2

Release Notes

Preview features

  • Fix formatting of single with-item with trailing comment (#14005)
  • [pyupgrade] Add PEP 646 Unpack conversion to * with fix (UP044) (#13988)

Rule changes

  • Regenerate known_stdlibs.rs with stdlibs 2024.10.25 (#13963)
  • [flake8-no-pep420] Skip namespace package enforcement for PEP 723 scripts (INP001) (#13974)

Server

  • Fix server panic when undoing an edit (#14010)

Bug fixes

  • Fix issues in discovering ruff in pip build environments (#13881)
  • [flake8-type-checking] Fix false positive for singledispatchmethod (TCH003) (#13941)
  • [flake8-type-checking] Treat return type of singledispatch as runtime-required (TCH003) (#13957)

Documentation

  • [flake8-simplify] Include caveats of enabling if-else-block-instead-of-if-exp (SIM108) (#14019)

Install ruff 0.7.2

Install prebuilt binaries via shell script

curl --proto '=https' --tlsv1.2 -LsSf https://github.com/astral-sh/ruff/releases/download/0.7.2/ruff-installer.sh | sh

Install prebuilt binaries via powershell script

powershell -ExecutionPolicy ByPass -c "irm https://github.com/astral-sh/ruff/releases/download/0.7.2/ruff-installer.ps1 | iex"

Download ruff 0.7.2

File Platform Checksum
ruff-aarch64-apple-darwin.tar.gz Apple Silicon macOS checksum
ruff-x86_64-apple-darwin.tar.gz Intel macOS checksum
ruff-aarch64-pc-windows-msvc.zip ARM64 Windows checksum
ruff-i686-pc-windows-msvc.zip x86 Windows checksum
ruff-x86_64-pc-windows-msvc.zip x64 Windows checksum

... (truncated)

Changelog

Sourced from ruff's changelog.

0.7.2

Preview features

  • Fix formatting of single with-item with trailing comment (#14005)
  • [pyupgrade] Add PEP 646 Unpack conversion to * with fix (UP044) (#13988)

Rule changes

  • Regenerate known_stdlibs.rs with stdlibs 2024.10.25 (#13963)
  • [flake8-no-pep420] Skip namespace package enforcement for PEP 723 scripts (INP001) (#13974)

Server

  • Fix server panic when undoing an edit (#14010)

Bug fixes

  • Fix issues in discovering ruff in pip build environments (#13881)
  • [flake8-type-checking] Fix false positive for singledispatchmethod (TCH003) (#13941)
  • [flake8-type-checking] Treat return type of singledispatch as runtime-required (TCH003) (#13957)

Documentation

  • [flake8-simplify] Include caveats of enabling if-else-block-instead-of-if-exp (SIM108) (#14019)

0.7.1

Preview features

  • Fix E221 and E222 to flag missing or extra whitespace around == operator (#13890)
  • Formatter: Alternate quotes for strings inside f-strings in preview (#13860)
  • Formatter: Join implicit concatenated strings when they fit on a line (#13663)
  • [pylint] Restrict iteration-over-set to only work on sets of literals (PLC0208) (#13731)

Rule changes

  • [flake8-type-checking] Support auto-quoting when annotations contain quotes (#11811)

Server

  • Avoid indexing the workspace for single-file mode (#13770)

Bug fixes

  • Make ARG002 compatible with EM101 when raising NotImplementedError (#13714)

Other changes

  • Introduce more Docker tags for Ruff (similar to uv) (#13274)

... (truncated)

Commits


Updates mypy from 1.10.0 to 1.13.0

Changelog

Sourced from mypy's changelog.

Mypy Release Notes

Next release

Change to enum membership semantics

As per the updated typing specification for enums, enum members must be left unannotated.

class Pet(Enum):
    CAT = 1  # Member attribute
    DOG = 2  # Member attribute
    WOLF: int = 3  # New error: Enum members must be left unannotated
species: str  # Considered a non-member attribute

In particular, the specification change can result in issues in type stubs (.pyi files), since historically it was common to leave the value absent:

# In a type stub (.pyi file)

class Pet(Enum):
# Change in semantics: previously considered members, now non-member attributes
CAT: int
DOG: int

# Mypy will now issue a warning if it detects this situation in type stubs:
# > Detected enum "Pet" in a type stub with zero members.
# > There is a chance this is due to a recent change in the semantics of enum membership.
# > If so, use `member = value` to mark an enum member, instead of `member: type`

class Pet(Enum):
# As per the specification, you should now do one of the following:
DOG = 1 # Member attribute with value 1 and known type
WOLF = cast(int, ...) # Member attribute with unknown value but known type
LION = ... # Member attribute with unknown value and unknown type

Contributed by Terence Honles in PR 17207 and Shantanu Jain in PR 18068.

Mypy 1.13

We’ve just uploaded mypy 1.13 to the Python Package Index (PyPI). Mypy is a static type checker for Python. You can install it as follows:

python3 -m pip install -U mypy

... (truncated)

Commits


Updates types-requests from 2.32.0.20240914 to 2.32.0.20241016

Commits


Updates pytest from 8.2.2 to 8.3.3

Release notes

Sourced from pytest's releases.

8.3.3

pytest 8.3.3 (2024-09-09)

Bug fixes

  • #12446: Avoid calling @property (and other instance descriptors) during fixture discovery -- by asottile{.interpreted-text role="user"}

  • #12659: Fixed the issue of not displaying assertion failure differences when using the parameter --import-mode=importlib in pytest>=8.1.

  • #12667: Fixed a regression where type change in [ExceptionInfo.errisinstance]{.title-ref} caused [mypy]{.title-ref} to fail.

  • #12744: Fixed typing compatibility with Python 3.9 or less -- replaced [typing.Self]{.title-ref} with [typing_extensions.Self]{.title-ref} -- by Avasam{.interpreted-text role="user"}

  • #12745: Fixed an issue with backslashes being incorrectly converted in nodeid paths on Windows, ensuring consistent path handling across environments.

  • #6682: Fixed bug where the verbosity levels where not being respected when printing the "msg" part of failed assertion (as in assert condition, msg).

  • #9422: Fix bug where disabling the terminal plugin via -p no:terminal would cause crashes related to missing the verbose option.

    -- by GTowers1{.interpreted-text role="user"}

Improved documentation

  • #12663: Clarify that the [pytest_deselected]{.title-ref} hook should be called from [pytest_collection_modifyitems]{.title-ref} hook implementations when items are deselected.
  • #12678: Remove erroneous quotes from [tmp_path_retention_policy]{.title-ref} example in docs.

Miscellaneous internal changes

  • #12769: Fix typos discovered by codespell and add codespell to pre-commit hooks.

8.3.2

pytest 8.3.2 (2024-07-24)

Bug fixes

  • #12652: Resolve regression [conda]{.title-ref} environments where no longer being automatically detected.

    -- by RonnyPfannschmidt{.interpreted-text role="user"}

8.3.1

pytest 8.3.1 (2024-07-20)

The 8.3.0 release failed to include the change notes and docs for the release. This patch release remedies this. There are no other changes.

... (truncated)

Commits


Updates pytest-cov from 5.0.0 to 6.0.0

Changelog

Sourced from pytest-cov's changelog.

6.0.0 (2024-10-29)

  • Updated various documentation inaccuracies, especially on subprocess handling.
  • Changed fail under checks to use the precision set in the coverage configuration. Now it will perform the check just like coverage report would.
  • Added a --cov-precision cli option that can override the value set in your coverage configuration.
  • Dropped support for now EOL Python 3.8.
Commits
  • 9540437 Bump version: 5.0.0 → 6.0.0
  • 9f81754 Further trim down envs and drop Python 3.8.
  • b12b5ec Update conf.
  • 23f4b27 Update changelog.
  • 291a04f Bump test deps and trim config.
  • 08f1101 Add --cov-precision option. Close #655.
  • 76fe2a7 Move the warnings/errors in a place that doesn't import anything.
  • a9ea7b7 Implement error/warning for the bad dynamic_context being set in config.
  • c299e01 Add explicit suffixing to make it easier to see the identify the sources/usag...
  • c87e546 Add reproducer for weird xdist dynamic_context interaction. Ref #604.
  • Additional commits viewable in compare view


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dependabot[bot] commented 2 weeks ago

Superseded by #338.