fiji / Stitching

Fiji's Stitching plugins reconstruct big images from tiled input images.
http://imagej.net/Stitching
GNU General Public License v2.0
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Multithreading #34

Open zbjornson opened 9 years ago

zbjornson commented 9 years ago

I'm working on moving some batch operations using this plugin to a compute cluster for a colleague. I've been trying multiple machine types (ranging from 1 to 32 cores) but I don't see that it's substantially using more than one core (no more than 20% of the cores beyond the first). I'm running "Grid/Collection stitching" with about 20 images in the grid, and have computation_parameters=[Save computation time (but use more RAM)]. Is this expected behavior? Thanks!