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fiji / Trainable_Segmentation

Fiji library to perform image segmentation based on the Weka learning schemes
https://imagej.net/Trainable_Weka_Segmentation
GNU General Public License v3.0
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Tests fail again with ImageJ 1.53u #75

Closed ctrueden closed 1 year ago

ctrueden commented 1 year ago 
$ mvn -Dij.version=1.53u clean test
...
[ERROR] Tests run: 4, Failures: 3, Errors: 0, Skipped: 0, Time elapsed: 13.356 s <<< FAILURE! - in trainableSegmentation.BasicTest
[ERROR] bridge(trainableSegmentation.BasicTest)  Time elapsed: 13.129 s  <<< FAILURE!
java.lang.AssertionError: expected:<0> but was:<490>
    at trainableSegmentation.BasicTest.bridge(BasicTest.java:81)

[ERROR] testDefaultFeatureGenerationMT(trainableSegmentation.BasicTest)  Time elapsed: 0.13 s  <<< FAILURE!
java.lang.AssertionError: expected:<0> but was:<3055>
    at trainableSegmentation.BasicTest.testDefaultFeaturesOnNuclei(BasicTest.java:105)
    at trainableSegmentation.BasicTest.testDefaultFeatureGenerationMT(BasicTest.java:91)

[ERROR] testDefaultFeatureGenerationST(trainableSegmentation.BasicTest)  Time elapsed: 0.085 s  <<< FAILURE!
java.lang.AssertionError: expected:<0> but was:<3055>
    at trainableSegmentation.BasicTest.testDefaultFeaturesOnNuclei(BasicTest.java:105)
    at trainableSegmentation.BasicTest.testDefaultFeatureGenerationST(BasicTest.java:86)

@hinerm wrote:

looks like we just need to re-generate the outputs by running the BasicTest main method, after updating to a pom-scijava with a 1.53u dep

ctrueden commented 1 year ago

Fixed by ff41b4f5a9d38bdad83b493345e12097924e7eeb.