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fiji / register_virtual_stack_slices

Fiji package for registering and transforming arbitrarily large sequences of images
https://imagej.net/Register_Virtual_Stack_Slices
GNU General Public License v3.0
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Could not save Rigid transforms #3

Closed bpavie closed 8 years ago

bpavie commented 8 years ago

Hi I tried to save the transforms with rigid contrains but the file is not saved. I also tried using the jython script with no result neither.

iarganda commented 8 years ago

Hello @bpavie

Can you tell me step by step what you did? I just run an affine registration with rigid constraints and it worked for me.

bpavie commented 8 years ago

I tried to register 2 images using rig transformation by using the jython script described on the plugin page in Scripting / PlugIn with the same parameters. After the run, the images are correctly registered but the transform file is not saved in the transf_dir directory.

iarganda commented 8 years ago

I just tried the script and it works for me. Did you get any error message in the log window? Are you sure the path to the transformation directory is right?

bpavie commented 8 years ago

Yes, the path is correct. I will try with a more up-to-date Fiji, and will let you know.

iarganda commented 8 years ago

OK, please, let me know if find a solution.

bpavie commented 8 years ago

It looks to work with the last version, sorry for the noise and thanks again for this plugin! I couldn't reproduce the bug on my Fiji version.

iarganda commented 8 years ago

I'm glad to hear that!