[DataCap Application] FILTAKES - UK Biobank Pan-Ancestry Summary Statistics

filtakes commented 1 year ago

Data Owner Name

Analytic and Translational Genetics Unit, Massachusetts General Hospital and the Broad Institute

What is your role related to the dataset

Data Preparer

Data Owner Country/Region

United Kingdom

Data Owner Industry

Life Science / Healthcare

Website

https://pan.ukbb.broadinstitute.org/

Social Media

http://www.filtakes.com

Total amount of DataCap being requested

2PiB

Expected size of single dataset (one copy)

143.5 TiB

Number of replicas to store

10

Weekly allocation of DataCap requested

500TiB

On-chain address for first allocation

f1l7b3sko5hqtpsb3pwjqqymh3ssoslucafzhd2jy

Data Type of Application

Public, Open Dataset (Research/Non-Profit)

Custom multisig

[ ] Use Custom Multisig

Identifier

No response

Share a brief history of your project and organization

Founded in 2021, filtakes is a technology company focusing on distributed storage technology, data computing and intelligent AI. We provide data storage and technical support services to various companies and have complete industry solutions.

We provide customers with technical services such as data collection and download, data storage, and big data model training to help customers gain deep insights from data and promote business decision-making and innovation.

Is this project associated with other projects/ecosystem stakeholders?

No

If answered yes, what are the other projects/ecosystem stakeholders

No response

Describe the data being stored onto Filecoin

https://registry.opendata.aws/broad-pan-ukb/
UK Biobank Pan-Ancestry Summary Statistics
A multi-ancestry analysis of 7,221 phenotypes using a generalized mixed model association testing framework, spanning 16,119 genome-wide association studies. We provide standard meta-analysis across all populations and with a leave-one-population-out approach for each trait. The data are provided in tsv format (per phenotype) and Hail MatrixTable (all phenotypes and variants). Metadata is provided in phenotype and variant manifests.

Where was the data currently stored in this dataset sourced from

AWS Cloud

If you answered "Other" in the previous question, enter the details here

No response

If you are a data preparer. What is your location (Country/Region)

China

If you are a data preparer, how will the data be prepared? Please include tooling used and technical details?

Singularity or go-graphsplit

If you are not preparing the data, who will prepare the data? (Provide name and business)

No response

Has this dataset been stored on the Filecoin network before? If so, please explain and make the case why you would like to store this dataset again to the network. Provide details on preparation and/or SP distribution.

According to my investigation, no organization or individual currently stores this data on the filecoin network.

Please share a sample of the data

https://registry.opendata.aws/broad-pan-ukb/
aws s3 ls --no-sign-request --recursive --human-readable --summarize s3://pan-ukb-us-east-1/
Total Size: 143.5 TiB

Confirm that this is a public dataset that can be retrieved by anyone on the Network

[X] I confirm

If you chose not to confirm, what was the reason

No response

What is the expected retrieval frequency for this data

Yearly

For how long do you plan to keep this dataset stored on Filecoin

1.5 to 2 years

In which geographies do you plan on making storage deals

Greater China, Asia other than Greater China, North America, Europe

How will you be distributing your data to storage providers

HTTP or FTP server, Shipping hard drives, Lotus built-in data transfer

How do you plan to choose storage providers

Slack, Partners

If you answered "Others" in the previous question, what is the tool or platform you plan to use

No response

If you already have a list of storage providers to work with, fill out their names and provider IDs below

f01153105    Fujian mine world Technology Co., Ltd  Japan
f01946104   SiChuan ZhuaYin Technology Co., Ltd  China
f01985775   GREATER HEAT  US
f02311133    NKD Tech  HK
f01660795   Shenzhen Brilliance Technology Co., LTD  China

We will update here as we reach out to more SPs

How do you plan to make deals to your storage providers

Boost client, Singularity

If you answered "Others/custom tool" in the previous question, enter the details here

No response

Can you confirm that you will follow the Fil+ guideline

Yes

large-datacap-requests[bot] commented 1 year ago

Thanks for your request!

Heads up, you’re requesting more than the typical weekly onboarding rate of DataCap!

large-datacap-requests[bot] commented 1 year ago

Thanks for your request! Everything looks good. :ok_hand:

A Governance Team member will review the information provided and contact you back pretty soon.

filtakes commented 1 year ago

@Sunnyiscoming As required by the notary, I will apply separately! https://github.com/filecoin-project/filecoin-plus-large-datasets/issues/2246

Sunnyiscoming commented 1 year ago

Could you send an email to filplus-app-review@fil.org with your official domain in order to confirm your identity? Email name should includes the issue id #2247.
Have you prepared enough token for sector pledge?
Per the https://github.com/filecoin-project/notary-governance/issues/922 for Open, Public Dataset applicants, please complete the following Fil+ registration form to identify yourself as the applicant and also please add the contact information of the SP entities you are working with to store copies of the data.

filtakes commented 1 year ago

Could you send an email to filplus-app-review@fil.org with your official domain in order to confirm your identity? Email name should includes the issue id [DataCap Application] FILTAKES - UK Biobank Pan-Ancestry Summary Statistics #2247.

Have you prepared enough token for sector pledge?

Per the Modification: Changes required to public open dataset application flow notary-governance#922 for Open, Public Dataset applicants, please complete the following Fil+ registration form to identify yourself as the applicant and also please add the contact information of the SP entities you are working with to store copies of the data.

@Sunnyiscoming 1、Our official email contact@filtakes.com has tried sending emails to filplus-app-review@fil.org many times, but it keeps prompting: Name service error for name=fil.org type=MX: Host not found. We tested sending to other mailboxes to confirm that there is no problem with our mailbox. 2、Yes, we have enough tokens 3、The form has been completed

filtakes commented 1 year ago

Dear @Sunnyiscoming, any update here?

Sunnyiscoming commented 1 year ago

I have tried to send email and successed. You can use other email address and send with the business license.

filtakes commented 1 year ago

I have tried to send email and successed. You can use other email address and send with the business license.

@Sunnyiscoming We tried using a personal business email and the message was sent successfully, please confirm it!

filtakes commented 1 year ago

@Sunnyiscoming Have you received our email? and can our application proceed to the next step?

filtakes commented 1 year ago

Dear @Sunnyiscoming , we are waiting for your reply, it is very much appreciated.

github-actions[bot] commented 1 year ago

This application has not seen any responses in the last 10 days. This issue will be marked with Stale label and will be closed in 4 days. Comment if you want to keep this application open.

-- Commented by Stale Bot.

filtakes commented 1 year ago

@galen-mcandrew @raghavrmadya @Kevin-FF-USA @Sunnyiscoming any update here?

ghost commented 1 year ago

Please provide SP entities and contacts. You are planning 10 copies, there are 4 names listed. Closing until updated.

filecoin-project / filecoin-plus-large-datasets