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filip-husnik / pseudofinder

Detection of pseudogene candidates in bacterial and archaeal genomes.
GNU General Public License v3.0
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Output log file #50

Closed navkahlon240 closed 1 year ago

navkahlon240 commented 1 year ago

After getting the results in the output log file about total number of pseudogenes, pseudofinder categorize it into short, long and fragmented genes. What does this short genes imply. On what basis these have been categorized into short and long genes?

mitchso commented 1 year ago

Hi,

Please see our wiki and manuscript for detailed explanations of the criteria for each pseudogene type.

https://github.com/filip-husnik/pseudofinder/wiki/4.-How-does-Pseudofinder-detect-pseudogene-candidates%3F

Best, Mitch