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finsberg / ldrb

A software for assigning myocardial fiber orientations based on the Laplace Dirichlet Ruled-Based algorithm
http://finsberg.github.io/ldrb
GNU Lesser General Public License v3.0
22 stars 8 forks source link

Building FEniCS 2024 #112

Closed AnoopRKulkarni closed 3 months ago

AnoopRKulkarni commented 3 months ago

Hi,

I already have PETSc installed as part of openCARP installation on my machine. Looks like just doing "sudo apt install fenicsx" does not work because of existing PETSc installation. Says "import dolfinx" - module not found!

I was exploring an option of building FEniCS from sources. However the instructions are not very clear. And also how much of a change do I need to make to "ldrb", because it uses the "dolfin" and not "dolfinx" interface.

Any advice is highly appreciated.

~anoop

finsberg commented 3 months ago

Hi @AnoopRKulkarni, there is a new package of ldrb for dolfinx that you can find here: https://github.com/finsberg/fenicsx-ldrb/

AnoopRKulkarni commented 3 months ago

Hi @AnoopRKulkarni, there is a new package of ldrb for dolfinx that you can find here: https://github.com/finsberg/fenicsx-ldrb/

Brilliant! Thanks so much!

AnoopRKulkarni commented 3 months ago

I tried running the sample code. When I try to import ldrb, I get the following error

ModuleNotFoundError: No module named 'adios2'

If I do "pip install adios2", it messes up dolfinx import

~anoop

finsberg commented 3 months ago

@AnoopRKulkarni Could you please open the issue in the correct repository, and also explain how you installed FEniCSx and what OS you are using. Thanks

AnoopRKulkarni commented 3 months ago

Will do. Apologies..