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firaswehbe / eutilsutils

utils for eutils (based on BioPython)
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eFetch demo in BioEntrezGeneral.ipynb #4

Open firaswehbe opened 8 years ago

firaswehbe commented 8 years ago

Demo 3 techniques

  1. Parse XML piecemeal using Entrez.parse()
  2. Parse XML entirely using Entrez.read()
  3. Parse MEDLINE stream piecemeal using Medline.parse()
firaswehbe commented 8 years ago

Rely on #3 so we can re-use the same query_key and WebEnv