fizwit easy_update issues

fizwit / easy_update

Update EasyBuild package configuration files for R and Python bundles

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issues

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Add toolchain foss/2023b

#40 lazariv opened 8 months ago
0
Update toolchains

#39 surak closed 1 year ago
0
add distro to requirements

#38 mboisson opened 1 year ago
0
add gfbf-2022b

#37 fizwit closed 1 year ago
0
gfbf/2022b toolchain needs to be added

#36 verdurin closed 1 year ago
1
foss/2022a toolchain needs to be added

#35 verdurin closed 1 year ago
1
it still requires EasyBuild module to be loaded

#34 eylenth opened 1 year ago
0
easy_update not updating anything

#33 casparvl opened 3 years ago
7
easy_update exits with warning Bioconductor version is not set, even when not using BioConductor

#32 jshelly opened 3 years ago
0
Subtoolchains not considered when searching for ECs

#31 Flamefire closed 4 years ago
3
easy_update is adding python packages present in dependencies

#30 Flamefire closed 4 years ago
1
No output (output file is 0 bytes)

#29 surak closed 4 years ago
1
Standard EB's R package won't work

#28 surak closed 4 years ago
1
Easyblock-less easyconfigs make easy_update unhappy, too.

#27 surak opened 4 years ago
0
Documentation on what is required from python

#26 surak opened 4 years ago
0
Giving file path makes easy_update unhappy

#25 surak opened 4 years ago
0
fix AttributeError for exts_defaultclass + add Python version check

#24 boegel closed 4 years ago
1
Increment requests to 2.22.0 to avoid clash with urllib3 requirements

#23 verdurin closed 4 years ago
1
packaging.marker error

#22 verdurin opened 5 years ago
3
Traceback with --search

#21 verdurin closed 5 years ago
1
Source URLs should use the correct Bioconductor version

#20 verdurin closed 5 years ago
1
Error with Bioconductor update

#19 verdurin closed 5 years ago
1
Fix deprecated imp (since 3.4)

#18 ccoulombe closed 5 years ago
1
Fix AttributeError when R was not built with extensions

#17 ccoulombe closed 5 years ago
0
combine search with module dependency check

#16 fizwit closed 5 years ago
1
Canonicalize CRAN links

#15 katrinleinweber closed 5 years ago
2
Dependencies error reported with search

#14 verdurin closed 5 years ago
1
Typo read bioconductor packages

#13 shahzebsiddiqui closed 5 years ago
0
support Python and R bundles

#12 fizwit closed 5 years ago
0
Bioconductor support seems to include CRAN extensions too

#11 verdurin closed 5 years ago
2
Request to provide an example of the additions file

#10 verdurin closed 5 years ago
1
Duplicates lead to incorrect output

#9 verdurin closed 5 years ago
1
Error with Python version support

#8 verdurin closed 5 years ago
1
added requirements file

#7 mboisson closed 5 years ago
0
SyntaxError: invalid syntax

#6 ponomarevsy closed 6 years ago
4
IndexError: list assignment index out of range

#5 pescobar closed 7 years ago
2
Fix some typos and add more preformatting of technical terms

#4 verdurin closed 7 years ago
1
issue #2 fixed

#3 fizwit closed 7 years ago
0
Incorrect exts_list syntax

#2 verdurin closed 7 years ago
1
Update README.md

#1 verdurin closed 7 years ago
1