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flatironinstitute / CaImAn-MATLAB

Complete Matlab pipeline for large scale calcium imaging data analysis
GNU General Public License v2.0
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Master #24

Closed zhoupc closed 8 years ago

zhoupc commented 8 years ago
  1. initialize_components.m: after the initialization, K could be smaller than the pre-specified number. update its value with the initialization results.

2, greedyROI_corr.m: allows the input argument ‘sn’ to be empty variable. update code for saving video of the initialization procedure.

3, HALS_2d.m: reshape input argument ‘Y’ to represent each frame with one column.

4, HALS_2d.m: avoid the problem of sparse representation of ‘A’

5, HALS.m: I replace it with HALS_2d.m. this is the same implementation as Johannes’s python implementation.