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flatironinstitute / NoRMCorre

Matlab routines for online non-rigid motion correction of calcium imaging data
GNU General Public License v2.0
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sizY not specified when loading a tiff via filename #3

Closed Enakcihc closed 7 years ago

Enakcihc commented 7 years ago

I was trying to run NoRMCorre with the filename of a tiff as the input argument Y. [M1,shifts1,template1] = normcorre(name,options_rigid)

turns out it grabs the info for the tiff (lines 24-26 of normcorre) tiffInfo = imfinfo(Y); filetype = 'tif'; T = length(tiffInfo); but did not specify the variable sizY and ran into an error at line 49 of normcorre nd = length(sizY)-1; % determine whether imaging is 2d or 3d

epnev commented 7 years ago

Hi @Enakcihc Thanks for catching this! The bug is fixed now.