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flatironinstitute / deepblast

Neural Networks for Protein Sequence Alignment
BSD 3-Clause "New" or "Revised" License
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DeepBLAST issue with model load #139

Closed mortonjt closed 1 year ago

mortonjt commented 1 year ago

https://github.com/tymor22/tm-vec/issues/24

@blackwer

CrazyHsu commented 1 year ago

Hi, Jamie, has this issue been fixed?

mortonjt commented 1 year ago

I’m not seeing this error on my end. But we did update the readme to download protT5 locally, so you can try again

On Thu, Sep 28, 2023 at 2:39 AM Feng Xu @.***> wrote:

Hi, Jamie, has this issue been fixed?

— Reply to this email directly, view it on GitHub https://github.com/flatironinstitute/deepblast/issues/139#issuecomment-1738554683, or unsubscribe https://github.com/notifications/unsubscribe-auth/AA75VXJWLAPGZDF5WMTXOMTX4ULSTANCNFSM6AAAAAA4YHZ6PI . You are receiving this because you authored the thread.Message ID: @.***>

mortonjt commented 1 year ago

Hi @CrazyHsu thanks for your patience. I have some time to take a deeper look into this. Feel free to test out the updated instructions and load_model method.