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flatironinstitute / nemos

NEural MOdelS, a statistical modeling framework for neuroscience.
https://nemos.readthedocs.io/
MIT License
82 stars 8 forks source link

Development #210

Closed BalzaniEdoardo closed 3 months ago

BalzaniEdoardo commented 3 months ago

Merge development into main. Main changes:

  1. New API for: Regularizer, BaseRegressor and GLM. Regularizers are now stateless, and all the hyperparameters for the regularizers and solvers can be set at BaseRegressor initialization. See #183 for more info.
  2. Updated contributing guide and developers notes. See #198
  3. Improved API for TransformerBasis. All basis attribute are accessible directly from the transformer basis. This facilitates cross-validation and inspection. See #169.
  4. Improved Calcium imaging tutorial. See #159.

Thanks to @clewis7, @bagibence and, @EricThomson for the great contributions! 🚀 🚀 🚀

codecov-commenter commented 3 months ago

Codecov Report

Attention: Patch coverage is 97.68638% with 9 lines in your changes missing coverage. Please review.

Project coverage is 97.30%. Comparing base (23433ce) to head (b5f0808). Report is 1 commits behind head on main.

Files Patch % Lines
src/nemos/base_regressor.py 96.35% 5 Missing :warning:
src/nemos/basis.py 96.61% 4 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #210 +/- ## ========================================== + Coverage 97.23% 97.30% +0.06% ========================================== Files 15 18 +3 Lines 1484 1669 +185 ========================================== + Hits 1443 1624 +181 - Misses 41 45 +4 ```

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