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flatironinstitute / spikeforest2

SpikeForest -- spike sorting analysis for website -- version 2
Apache License 2.0
34 stars 12 forks source link

Data server down? #26

Closed breadnbeer closed 4 years ago

breadnbeer commented 4 years ago

Is the data server up? I'm using the spike forest python API which was working until yesterday. Today it seems it is not able to connect to the server. To reproduce, if I try the example given in the README, it gets stuck at

recording = AutoRecordingExtractor(recording_path, download=False)

and after waiting a long time I get these messages:

Retrying http request in 0.2 sec: http://132.249.245.245:24342/check/sha1/5863072e3fdef93186f8b977b7f3021c9b29cb48?channel=public&signature=d5d52291187eeb38d45cb6db03ca1333accb11ad

Seems like the server is not responding. Its the same case if I try to access any other dataset. Can you please check?

magland commented 4 years ago

Thanks for the report, seems like that server is inaccessible, I have made an inquiry about this and will respond soon.

magland commented 4 years ago

@breadnbeer, I think it should be up now, let me know if it works.

breadnbeer commented 4 years ago

The server is still not reachable. Tried from two different machines on different networks - a university network and a home network.

magland commented 4 years ago

Could you show the error message? We updated new IPs in the config (which is pulled down from github at runtime), and I wonder if the correct IP is being retrieved.

On Tue, Sep 1, 2020 at 10:38 AM breadnbeer notifications@github.com wrote:

The server is still not reachable. Tried from two different machines on different networks - a university network and a home network.

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/flatironinstitute/spikeforest2/issues/26#issuecomment-684902625, or unsubscribe https://github.com/notifications/unsubscribe-auth/AA4CIQHU3CE7GRHN2MCAMADSDUBOHANCNFSM4QQ6AAPA .

breadnbeer commented 4 years ago

I get these messages: Retrying http request in 0.2 sec: http://132.249.245.245:24342/check/sha1/ee5214337b2e01910a92c3613a4b8ad4be4dc476?channel=public&signature=7ec2cd38f04e02cb1d9b2e29b9cb01dc343a7ec5

magland commented 4 years ago

Thanks, that's the old IP -- my mistake, there was one more place I needed to update it. Please try again in >=120 seconds. J

On Tue, Sep 1, 2020 at 10:48 AM breadnbeer notifications@github.com wrote:

I get these messages: Retrying http request in 0.2 sec: http://132.249.245.245:24342/check/sha1/ee5214337b2e01910a92c3613a4b8ad4be4dc476?channel=public&signature=7ec2cd38f04e02cb1d9b2e29b9cb01dc343a7ec5

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/flatironinstitute/spikeforest2/issues/26#issuecomment-684909952, or unsubscribe https://github.com/notifications/unsubscribe-auth/AA4CIQC3HXE43R4MKLZ76NLSDUCULANCNFSM4QQ6AAPA .

breadnbeer commented 4 years ago

It is still trying the same server. Retrying http request in 0.2 sec: http://132.249.245.245:24342/check/sha1/ee5214337b2e01910a92c3613a4b8ad4be4dc476?channel=public&signature=7ec2cd38f04e02cb1d9b2e29b9cb01dc343a7ec5

I don't suppose I need to download and reinstall spikeforest2, do I?

magland commented 4 years ago

Oops again, please try now.

(and if it still doesn't work, delete the ~/.kachery directory and try again)

breadnbeer commented 4 years ago

It's working now. Thanks a lot! I didn't have to delete ~/.kachery or do anything else.

The project is great! It's been very useful. Thanks.

magland commented 4 years ago

Awesome, glad it's working! You may be interested in this project which is sort of the next phase of data sharing, etc: https://github.com/flatironinstitute/neuropixels-data-sep-2020