flatironinstitute / spikeforest_old

SpikeForest -- spike sorting analysis for website
Apache License 2.0
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Use transform_traces.py in hs2 wrapper #30

Closed magland closed 5 years ago

magland commented 5 years ago

From Matthias: Internally HS2 makes only integer calculations, therefore the data has to be in a particular range. Cole wrote a little preeprocessing data transform tool: https://github.com/SpikeInterface/spiketoolkit/blob/master/spiketoolkit/preprocessing/transform_traces.py

This just makes a new extractor, and would be useful to have available. Then the hs launcher code could check the data range, and scale if necessary. Then we'll do very well on Marre's data...