search

fli-iam / shanoir-ng

Shanoir (SHAring iN vivO Imaging Resources)
GNU General Public License v3.0
22 stars 22 forks source link

Interoperability: Findable of FAIR: DOIs in Shanoir #1541

Open michaelkain opened 1 year ago

michaelkain commented 1 year ago

This issue will contribute to the long-term goal of facilitating data sharing using Shanoir following the FAIR principles (FAIR=Findable Accessible Interoperable Reusable).

Two implementation options are possible:

  1. Data (study in Shanoir) to Article, proposed by Elise (ebannier): We add an additional text field to each study in Shanoir, called studyDOI, that allows any study admin to add an URL for a DOI, that links to the corresponding paper
  2. Article to Data (study in Shanoir), Shanoir has a button in study details "generate DOI", that produces a DOI with basic data of the study. The DOI produced resolves to a study data access URL on the same Shanoir server instance. The idea is, that this DOI can be put into a paper and when users click on it, they are directly on the page "access request to study" in Shanoir. The study admin can then validate their access request to give them access to the data. This option uses the REST-API of datacite.org to create a DOI and display it in Shanoir and is therefore technically slightly more complex to realize. The case to delete an existing DOI might be to consider as well and a mapping of the meta-data will have to be done, between Shanoir study meta-data and the meta-data of "create DOI".

Happy for any feedback and with kind regards, Michael

michaelkain commented 1 year ago

@ebannier @cmaumet @albangaignard Hi Elise, hi Camille, hi Alban, I would be happy on your feedback about the above feature. Thank you and with kind regards, Michael

cmaumet commented 1 year ago

Hi @michaelkain! Thanks for reaching out. Both options seems very complementary to me. The second option makes it easy to cite the dataset directly (and to get access). And the first is also useful to link a dataset with a paper (when there is one).

albangaignard commented 1 year ago

Thanks @michaelkain ! I also think that the two options are necessary. Both options could later be aligned to http://schema.org/citation (https://bioschemas.org/profiles/Study/0.3-DRAFT, https://bioschemas.org/profiles/Dataset/1.1-DRAFT).

pierrehenri-dauvergne commented 1 year ago

Michel Dojat answered by mail : "Hi Michael, nice and when these services will be operational it is important to communicate ; data visibility is a key cue to motivate users to use the infra and to boost data sharing. best M"