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flimfit / FLIMfit

State of the art fluorescence lifetime imaging analysis software
http://flimfit.org
GNU General Public License v2.0
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Error in 5.1.1 trying to generate an IRF shift map #348

Open Powerfultool opened 6 years ago

Powerfultool commented 6 years ago

Loading IRF file works fine, Adding time-varying background works as well, but then calling "Create IRF shift map" causes this error. This appears to happen whether you have an IRF loaded or not.

======================== Undefined function 'xcorr' for input arguments of type 'single'.

Error in flim_data_series/generate_t0_map (line 75)

Error in front_end_menu_controller/menu_tools_create_irf_shift_map_callback (line 1115)

Error in front_end_menu_controller>@(varargin)obj.menu_tools_create_irf_shift_map_callback(varargin{:})

Error in EC (line 7)

Error in front_end_menu_controller>@(x,y)EC(fcn) (line 263)

seanwarren commented 6 years ago

Hi Sunil, the flimfit build server currently does not have all the required MATLAB toolboxes - I'm speaking to Paul and Chris to move the server to imperial to resolve this. This will fix this error. Is this blocking for you? I can build you a version on my computer if so

Powerfultool commented 6 years ago

Hi Sean,

No worries – have gone back to an earlier version for now, so no rush or anything – was wondering if the solution to the other mysterious fitting issue was in there!

Regards, Sunil

From: Sean Warren [mailto:notifications@github.com] Sent: 24 July 2018 16:10 To: flimfit/FLIMfit FLIMfit@noreply.github.com Cc: Kumar, Sunil sunil.kumar03@imperial.ac.uk; Author author@noreply.github.com Subject: Re: [flimfit/FLIMfit] Error in 5.1.1 trying to generate an IRF shift map (#348)

Hi Sunil, the flimfit build server currently does not have all the required MATLAB toolboxes - I'm speaking to Paul and Chris to move the server to imperial to resolve this. This will fix this error. Is this blocking for you? I can build you a version on my computer if so

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHubhttps://github.com/flimfit/FLIMfit/issues/348#issuecomment-407441819, or mute the threadhttps://github.com/notifications/unsubscribe-auth/AI2vusVgQ4rjjf1L2G9_MUDmzvkhURwvks5uJzirgaJpZM4VcnIs.

seanwarren commented 6 years ago

Yes it should be fixed. You should've able to load a SV IRF created in an earlier version if you'd like to test it

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On Wed, Jul 25, 2018 at 1:27 AM +1000, "Powerfultool" notifications@github.com<mailto:notifications@github.com> wrote:

Hi Sean,

No worries – have gone back to an earlier version for now, so no rush or anything – was wondering if the solution to the other mysterious fitting issue was in there!

Regards, Sunil

From: Sean Warren [mailto:notifications@github.com] Sent: 24 July 2018 16:10 To: flimfit/FLIMfit FLIMfit@noreply.github.com Cc: Kumar, Sunil sunil.kumar03@imperial.ac.uk; Author author@noreply.github.com Subject: Re: [flimfit/FLIMfit] Error in 5.1.1 trying to generate an IRF shift map (#348)

Hi Sunil, the flimfit build server currently does not have all the required MATLAB toolboxes - I'm speaking to Paul and Chris to move the server to imperial to resolve this. This will fix this error. Is this blocking for you? I can build you a version on my computer if so

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHubhttps://github.com/flimfit/FLIMfit/issues/348#issuecomment-407441819, or mute the threadhttps://github.com/notifications/unsubscribe-auth/AI2vusVgQ4rjjf1L2G9_MUDmzvkhURwvks5uJzirgaJpZM4VcnIs.

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NOTICE Please consider the environment before printing this email. This message and any attachments are intended for the addressee named and may contain legally privileged/confidential/copyright information. If you are not the intended recipient, you should not read, use, disclose, copy or distribute this communication. If you have received this message in error please notify us at once by return email and then delete both messages. We accept no liability for the distribution of viruses or similar in electronic communications. This notice should not be removed.

Powerfultool commented 6 years ago

Oh, cool – will give it a try in the next few days – am going to be on other stuff for a bit, but if I don’t get back about it, please bug me!

From: Sean Warren [mailto:notifications@github.com] Sent: 24 July 2018 16:41 To: flimfit/FLIMfit FLIMfit@noreply.github.com Cc: Kumar, Sunil sunil.kumar03@imperial.ac.uk; Author author@noreply.github.com Subject: Re: [flimfit/FLIMfit] Error in 5.1.1 trying to generate an IRF shift map (#348)

Yes it should be fixed. You should've able to load a SV IRF created in an earlier version if you'd like to test it

Get Outlook for Androidhttps://aka.ms/ghei36

On Wed, Jul 25, 2018 at 1:27 AM +1000, "Powerfultool" notifications@github.com<mailto:notifications@github.com> wrote:

Hi Sean,

No worries – have gone back to an earlier version for now, so no rush or anything – was wondering if the solution to the other mysterious fitting issue was in there!

Regards, Sunil

From: Sean Warren [mailto:notifications@github.com] Sent: 24 July 2018 16:10 To: flimfit/FLIMfit FLIMfit@noreply.github.com Cc: Kumar, Sunil sunil.kumar03@imperial.ac.uk; Author author@noreply.github.com Subject: Re: [flimfit/FLIMfit] Error in 5.1.1 trying to generate an IRF shift map (#348)

Hi Sunil, the flimfit build server currently does not have all the required MATLAB toolboxes - I'm speaking to Paul and Chris to move the server to imperial to resolve this. This will fix this error. Is this blocking for you? I can build you a version on my computer if so

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHubhttps://github.com/flimfit/FLIMfit/issues/348#issuecomment-407441819, or mute the threadhttps://github.com/notifications/unsubscribe-auth/AI2vusVgQ4rjjf1L2G9_MUDmzvkhURwvks5uJzirgaJpZM4VcnIs.

— You are receiving this because you commented. Reply to this email directly, view it on GitHubhttps://github.com/flimfit/FLIMfit/issues/348#issuecomment-407447945, or mute the threadhttps://github.com/notifications/unsubscribe-auth/AB-Hj5SIpbNnwEVPHfQ_cGnbrdKqvvZBks5uJzzDgaJpZM4VcnIs.

NOTICE Please consider the environment before printing this email. This message and any attachments are intended for the addressee named and may contain legally privileged/confidential/copyright information. If you are not the intended recipient, you should not read, use, disclose, copy or distribute this communication. If you have received this message in error please notify us at once by return email and then delete both messages. We accept no liability for the distribution of viruses or similar in electronic communications. This notice should not be removed.

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imunro commented 6 years ago

Hi Sean Sounds like you've already sorted it but if you need hands-on in London to set the builds up just let mw know. Ian

seanwarren commented 6 years ago

Thanks Ian - hopefully all in hand but I'll let you know!

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On Wed, Jul 25, 2018 at 8:22 PM +1000, "imunro" notifications@github.com<mailto:notifications@github.com> wrote:

Hi Sean Sounds like you've already sorted it but if you need hands-on in London to set the builds up just let mw know. Ian

— You are receiving this because you commented. Reply to this email directly, view it on GitHubhttps://github.com/flimfit/FLIMfit/issues/348#issuecomment-407707839, or mute the threadhttps://github.com/notifications/unsubscribe-auth/AB-HjwRouWuOU8grRTtOBktdPkiVL6wBks5uKEbEgaJpZM4VcnIs.

NOTICE Please consider the environment before printing this email. This message and any attachments are intended for the addressee named and may contain legally privileged/confidential/copyright information. If you are not the intended recipient, you should not read, use, disclose, copy or distribute this communication. If you have received this message in error please notify us at once by return email and then delete both messages. We accept no liability for the distribution of viruses or similar in electronic communications. This notice should not be removed.