flimfit / FLIMfit

State of the art fluorescence lifetime imaging analysis software
http://flimfit.org
GNU General Public License v2.0
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FlimFit crash with put file #355

Closed PMLLancao closed 5 years ago

PMLLancao commented 5 years ago

Hello I got this message trying to use FlimFit. I am a mac user and I download the matlab runtime plugin first and then download flimfit, everything seems to run but I got this error report when I try to work with a ptu file.

Requested 1634205696x1 (12.2GB) array exceeds maximum array size preference. Creation of arrays greater than this limit may take a long time and cause MATLAB to become unresponsive. See array size limit or preference panel for more information.

Error in libpointer (line 17)

Error in flim_dll_interface/fit (line 186)

Error in flim_fit_controller/fit (line 73)

Error in flim_fit_controller/fit_pushbutton_callback (line 292)

Error in flim_fit_controller>@(varargin)obj.fit_pushbutton_callback(varargin{:}) (line 129)

Error in EC (line 7)

Another error that I see in the window log is: In an assignment A(:) = B, the number of elements in A and B must be the same. Error in dragzoom/RecalcZoomAxesLimits (line 1318) Error in dragzoom/ZoomAxes (line 1250) Error in dragzoom/ZoomMouse (line 1130) Error in dragzoom/WindowScrollWheelFcn2D (line 573) Error using flim_fit_ui (line 218) Error while evaluating Figure WindowScrollWheelFcn In an assignment A(:) = B, the number of elements in A and B must be the same. Error in dragzoom/RecalcZoomAxesLimits (line 1318) Error in dragzoom/ZoomAxes (line 1250) Error in dragzoom/ZoomMouse (line 1130) Error in dragzoom/WindowScrollWheelFcn2D (line 573) Error using flim_fit_ui (line 218) Error while evaluating Figure WindowScrollWheelFcn In an assignment A(:) = B, the number of elements in A and B must be the same. Error in dragzoom/RecalcZoomAxesLimits (line 1318) Error in dragzoom/ZoomAxes (line 1250) Error in dragzoom/ZoomMouse (line 1130) Error in dragzoom/WindowScrollWheelFcn2D (line 573) Error using flim_fit_ui (line 218) Error while evaluating Figure WindowScrollWheelFcn In an assignment A(:) = B, the number of elements in A and B must be the same. Error in dragzoom/RecalcZoomAxesLimits (line 1318) Error in dragzoom/ZoomAxes (line 1250) Error in dragzoom/ZoomMouse (line 1130) Error in dragzoom/WindowScrollWheelFcn2D (line 573) Error using flim_fit_ui (line 218) Error while evaluating Figure WindowScrollWheelFcn In an assignment A(:) = B, the number of elements in A and B must be the same. Error in dragzoom/RecalcZoomAxesLimits (line 1318) Error in dragzoom/ZoomAxes (line 1250) Error in dragzoom/ZoomMouse (line 1130) Error in dragzoom/WindowScrollWheelFcn2D (line 573) Error using flim_fit_ui (line 218) Error while evaluating Figure WindowScrollWheelFcn In an assignment A(:) = B, the number of elements in A and B must be the same. Error in dragzoom/RecalcZoomAxesLimits (line 1318) Error in dragzoom/ZoomAxes (line 1250) Error in dragzoom/ZoomMouse (line 1130) Error in dragzoom/WindowScrollWheelFcn2D (line 573) Error using flim_fit_ui (line 218) Error while evaluating Figure WindowScrollWheelFcn

What can I Do ?

Thanks

Pablo Munoz

seanwarren commented 5 years ago

Hi Pablo,

How large is the file you are trying to load (in terms of x, y and number of timepoints)? It seems like you are running out of memory

Thanks Sean

PMLLancao commented 5 years ago

Hi Sean Was super large but then I followed the recommendation of the video to upload de file and I did not have problem. You are right was a problem with the memory. I will keep trying the software.

Thank you

Pablo Munoz LLancao

On Mar 10, 2019, at 22:33, Sean Warren notifications@github.com wrote:

Hi Pablo,

How large is the file you are trying to load (in terms of x, y and number of timepoints)? It seems like you are running out of memory

Thanks Sean

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/flimfit/FLIMfit/issues/355#issuecomment-471384583, or mute the thread https://github.com/notifications/unsubscribe-auth/AXWTqIiHrACnrjHq3_HGfd3U83b8J4pvks5vVcB2gaJpZM4bl3KO.

seanwarren commented 5 years ago

Ok great, let me know if you run into any more problems