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flr / FLXSA

The FLXSA package
http://flr-project.org/FLXSA
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Missing phenotype value #11

Open wangmengdie-a opened 1 year ago

wangmengdie-a commented 1 year ago

Hi, I would like to ask what to do if I have missing phenotype values? What does the phenotype file use to represent, is it NA or 0 or is it empty?

iagomosqueira commented 1 year ago

By phenotype do you mean the biological data, like weight-at-age or maturity? What are you missing in the FLStock object? It should be left initially as NA, unless the method needs it, like natural mortality.

wangmengdie-a commented 1 year ago

I have 519 individuals in my input genotype data, but only 471 phenotypes, in this case the phenotypes of the missing individuals in my phenotype data file are represented by NA? Or do I not add them.

wangmengdie-a commented 1 year ago

My phenotype is intramuscular fat weight

iagomosqueira commented 1 year ago

I think you are mistaking FLXSA with another piece of software. This is the repository for the Fishery Library in R (FLR) version of eXtended Survivors Analysis (XSA), a quantitative method for the assessment of fish stocks.

wangmengdie-a commented 1 year ago

Sincerely thank you！