Updates the QC output detection and reporting to try and handle "external" 'cellranger multi' outputs in a QC directory, i.e. outputs generated outside of the QC pipeline but which have a similar directory structure to the "canonical" versions i.e.
QC_DIR/cellranger_multi/VERSION/REFERENCE/...
The idea is that these would then also be reported in the HTML reports.
Updates the QC output detection and reporting to try and handle "external" 'cellranger multi' outputs in a QC directory, i.e. outputs generated outside of the QC pipeline but which have a similar directory structure to the "canonical" versions i.e.
The idea is that these would then also be reported in the HTML reports.