Addresses issue #882 by updating manage_fastqs.py's zip mode so that the MD5 checksum file is now a separate file (rather than being included in the ZIP archive with the Fastqs). The transfer_data.py utility has also been updated to accommodate this change. (Note that these changes don't introduce any new command line options for either of these utilities.)
There is also a minor bug fix in manage_fastqs.py to ensure that any filter on Fastq names is also applied when generating the checksums in zip mode (was previously not applied so all Fastqs were included in the checksum file).
Addresses issue #882 by updating
manage_fastqs.py'szipmode so that the MD5 checksum file is now a separate file (rather than being included in the ZIP archive with the Fastqs). Thetransfer_data.pyutility has also been updated to accommodate this change. (Note that these changes don't introduce any new command line options for either of these utilities.)There is also a minor bug fix in
manage_fastqs.pyto ensure that any filter on Fastq names is also applied when generating the checksums inzipmode (was previously not applied so all Fastqs were included in the checksum file).