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fls-bioinformatics-core / auto_process_ngs

Scripts and utilities for automatic processing & management of Illumina NGS sequencing data.
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QC pipeline: only run GTF to BED conversion if output doesn't already exist. #905

Closed pjbriggs closed 8 months ago

pjbriggs commented 8 months ago

Update the ConvertGTFToBED task in qc/pipeline so that the GTF to BED conversion is only performed if the expected output file doesn't already exist (addresses issue #901).