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fls-bioinformatics-core / auto_process_ngs

Scripts and utilities for automatic processing & management of Illumina NGS sequencing data.
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Fix updating stored paths when creating final archive #907

Closed pjbriggs closed 8 months ago

pjbriggs commented 8 months ago

Fixes a bug with updating the stored paths in the archive command, when the analysis directory is move to the final archive location.

The bug actually manifests in the report command, when the path to the archive is reported - the stored version of the path is reported, however this was not correct due to the failure of the update operations (which this PR is intended to fix). (NB the reporting problem should be fixed by PR #908.)