Adds 10xGenomics Chromium 5' as a recognised 10x platform, and Single Cell Immune Profiling as a valid library type
Implements a new QC protocol 10x_ImmuneProfiling for these data
Other changes include adding a list of known 10x platform-library combinations to check when analysis directories are created, and updating the cellranger multi template config generation to include immune profiling (and fix some issues for CellPlex and Flex).
Adds support for handling 10x Genomics Chromium 5' Single Cell Immune Profiling data.
Information on handling immune profiling analysis via
cellranger multican be found at https://support.10xgenomics.com/single-cell-vdj/software/pipelines/latest/using/multi10xGenomics Chromium 5'as a recognised 10x platform, andSingle Cell Immune Profilingas a valid library type10x_ImmuneProfilingfor these dataOther changes include adding a list of known 10x platform-library combinations to check when analysis directories are created, and updating the
cellranger multitemplate config generation to include immune profiling (and fix some issues for CellPlex and Flex).