fls-bioinformatics-core / auto_process_ngs

Scripts and utilities for automatic processing & management of Illumina NGS sequencing data.
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'archive' refuses to perform final archiving if empty 'Visium_images' dirs are present #940

Closed pjbriggs closed 5 months ago

pjbriggs commented 5 months ago

Update the archive command to stop with an error if final archiving is requested while empty Visium_images directories are present in at least one project (issue #902).

This behaviour can be overridden by specifying the --force option.