fls-bioinformatics-core / auto_process_ngs

Scripts and utilities for automatic processing & management of Illumina NGS sequencing data.
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bcl2fastq/reporting: fix the barplot for masked/padded reads per Fastq. #986

Closed pjbriggs closed 1 month ago

pjbriggs commented 1 month ago

Fix a bug in the reporting of masked and padded percentages of reads in each Fastq at the processing stage, in the add_per_fastq_statistics method of the ProcessingQCReport class - the proportion of padded reads was erroneously shown in the barplot as the sum of the masked and padded reads (so were overrepresented compared to the real data).