search

fmalmeida / MpGAP

Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads
https://mpgap.readthedocs.io/en/latest/
GNU General Public License v3.0
53 stars 10 forks source link

add 3 hybrid strategy #41

Open fmalmeida opened 1 year ago

fmalmeida commented 1 year ago

Add another hybrid strategy for samples where this might be the best option.

This strategy is to perform a short reads assembly and then scaffold with long reads.

fmalmeida commented 5 months ago

A tool that can be used for this is LongStitch.