search

fmalmeida / bacannot

Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
https://bacannot.readthedocs.io/en/latest/
GNU General Public License v3.0
96 stars 9 forks source link

also accept samplesheet in CSV/TSV #41

Open fmalmeida opened 2 years ago

fmalmeida commented 2 years ago

This brings forward the feature request that was first discussed at:

Since the issue was not related to it and is now closed, it was necessary to open a new issue.

As discussed by @abhi18av, it would be easier for people not familiar with YAML to also accept the input data via a CSV/TSV samplesheet.

Ideally, the pipeline would recognize de suffix and choose the best way to load it.