fmalmeida / gff-toolbox

Gff-toolbox is a toolbox of commands that enables one to get the gist of their GFF annotation files, as well as to analyse them in different ways.
https://github.com/fmalmeida/gff-toolbox/wiki
GNU General Public License v3.0
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add a "liftover-like" module #8

Open fmalmeida opened 2 years ago

fmalmeida commented 2 years ago

Add a module to receive a file containing two columns in order to fix the GFF chr names.

It gets in column 1 the names of chr we want to update and in column 2 the pattern for substitution, for "lift-over"