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fmi-faim / faim-ipa

A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)
BSD 3-Clause "New" or "Revised" License
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Stitching with 3D tiles #81

Closed tibuch closed 10 months ago

tibuch commented 10 months ago

The current DaskTileStitcher works only with 2D tiles. I have a use-case where the raw data is stored as 3D tiles and I must load the whole stack from the filesystem to access a single z plane. This leads to a lot of data loading overhead.

It would be nice if the current code could be modified to accept 3D tiles. The transformation/shifting should still only be in YX, but instead of moving only a single plane we could process a stack.

tibuch commented 10 months ago

Done with #82.