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fmi-faim / ipa-project-template

Copier template for image processing & analysis projects.
https://fmi-faim.github.io/ipa-project-template/
MIT License
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Use INIT_CWD for pixi tasks in the current directory #25

Closed imagejan closed 3 weeks ago

imagejan commented 2 months ago

Pixi version 0.28.0 added the INIT_CWD environment variable to allow tasks to be run in the directory where they were invoked, instead of the project directory (parent of pixi.toml).

https://github.com/prefix-dev/pixi/pull/1798

We might want to reconsider our current setup with WD=runs/example pixi run <...> and instead use INIT_CWD. This means however that we'll have to go back to running the tasks from the runs/<run_name> subdirectory.

tibuch commented 2 months ago

I like that we run everything from the root directory at the moment. If we change it back it would also require the user to create the directory.

imagejan commented 3 weeks ago

With the current approach using PIXI_PROJECT_ROOT in the task definition, we don't need INIT_CWD anywhere. Closing this.