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sok-marine-biodiversity
WIP: :crab: The state of knowledge of the US marine biodiversity :octopus:
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Add docker
#109
fmichonneau
closed
2 years ago
0
lawn package has been archived
#108
fmichonneau
opened
3 years ago
0
numbers from GP
#107
fmichonneau
opened
6 years ago
0
additonal figures: sampling through time
#106
fmichonneau
opened
6 years ago
0
do rarefaction curves for Pacific and Atlantic
#105
fmichonneau
opened
6 years ago
0
Add citations for examples of future predictions of communities
#104
fmichonneau
opened
6 years ago
0
Double check numbers in table 1
#103
fmichonneau
opened
6 years ago
1
differentiate obis and idigbio records in movie
#102
fmichonneau
opened
6 years ago
0
spell out current progress
#101
fmichonneau
opened
6 years ago
0
no offshore data point for PNW maps in Supplementary figures?
#100
fmichonneau
closed
6 years ago
1
geographic extent don't show in supplementary materials
#99
fmichonneau
closed
6 years ago
0
make movie that shows when/where new species are found
#98
fmichonneau
closed
6 years ago
0
numbers in first line of results, and fig.1 don't match
#97
fmichonneau
closed
6 years ago
0
in read_worms already substract vertebrates from chordata numbers
#96
fmichonneau
closed
6 years ago
0
deal with name conflicts across kingdom
#95
fmichonneau
closed
6 years ago
0
rewrite idigbio attribution to use mget method
#94
fmichonneau
closed
6 years ago
0
use mean instead of b-splines in identification level through time
#93
fmichonneau
closed
6 years ago
0
create steps that validate integrity of data stores before starting analysis
#92
fmichonneau
opened
6 years ago
1
standardize store names
#91
fmichonneau
closed
6 years ago
0
double check that targets that use `idigbio_records` filter out non marine species
#90
fmichonneau
closed
6 years ago
1
estimate proportion of inaccurate names
#89
fmichonneau
closed
6 years ago
1
mention level of digitization of West coast efforts
#88
fmichonneau
closed
6 years ago
0
try to estimate proportion of US records that don't have GPS coordinates in iDigBio
#87
fmichonneau
closed
6 years ago
0
add point of discussion about strengths and weaknesses of databases
#86
fmichonneau
closed
6 years ago
1
rephrase comparison of number of records and number of species for small phyla
#85
fmichonneau
closed
6 years ago
0
need stronger closing statement for importance of sampling
#84
fmichonneau
closed
6 years ago
0
extract records from bureau of mining
#83
fmichonneau
closed
6 years ago
1
redo latitudinal gradient figure
#82
fmichonneau
closed
6 years ago
0
estimate latitudinal spread
#81
fmichonneau
closed
6 years ago
0
add discussion about gradients
#80
fmichonneau
closed
6 years ago
0
add discussion about number of species in each geographic area
#79
fmichonneau
closed
6 years ago
0
explain better discrepencies in number of records
#78
fmichonneau
closed
6 years ago
0
remove fossils records from total iDigBio records
#77
fmichonneau
closed
6 years ago
0
create table of estimated diversity for inverts, plants, verts + fish
#76
fmichonneau
closed
6 years ago
0
include contributions of the different institutions to digitized collections
#75
fmichonneau
closed
6 years ago
1
calculate proportion of samples collected from continental shelf
#74
fmichonneau
closed
6 years ago
0
make contours of continental shelf more visible
#73
fmichonneau
closed
6 years ago
0
add geographic limits (eez; gom; pnw) to maps
#72
fmichonneau
closed
6 years ago
0
finish ITIS
#71
fmichonneau
closed
6 years ago
0
finish conversion from lazyeval to tidyeval
#70
fmichonneau
closed
6 years ago
1
calculate estimate for (1) percent digitized and (2) total number of species
#69
fmichonneau
closed
6 years ago
1
get proportion of records with missing bathymetric data from OBIS and iDigBio
#68
fmichonneau
closed
6 years ago
0
add "GOM" and "PNW" in upsetr plots
#67
fmichonneau
closed
7 years ago
0
add result numbers in abstract
#66
fmichonneau
closed
6 years ago
1
update figure title to convey take-home message
#65
fmichonneau
closed
6 years ago
0
remove records with high geographic uncertainty
#64
fmichonneau
closed
7 years ago
1
write acknowledgments
#63
fmichonneau
closed
6 years ago
0
calculate percentage of digitization from data
#62
fmichonneau
closed
7 years ago
0
make sure I use the combined list of species in proportion barcoded figure
#61
fmichonneau
closed
7 years ago
0
fix numbers displayed on proportion barcoded plot
#60
fmichonneau
closed
7 years ago
0
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