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fmicompbio / einprot

Proteomics analysis workflows
https://fmicompbio.github.io/einprot/
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Add FragPipe #5

Closed csoneson closed 1 year ago

codecov-commenter commented 1 year ago

Codecov Report

Merging #5 (7c05481) into main (2910869) will decrease coverage by 9.15%. The diff coverage is 47.21%.

@@            Coverage Diff             @@
##             main       #5      +/-   ##
==========================================
- Coverage   99.05%   89.90%   -9.15%     
==========================================
  Files          39       42       +3     
  Lines        3803     4390     +587     
==========================================
+ Hits         3767     3947     +180     
- Misses         36      443     +407
Impacted Files Coverage Δ
R/checkArgumentsFragPipe.R 0.00% <0.00%> (ø)
R/makeComplexDB.R 98.47% <0.00%> (ø)
R/readFragPipeInfo.R 0.00% <0.00%> (ø)
R/runFragPipeAnalysis.R 0.00% <0.00%> (ø)
R/summaryPlots.R 95.38% <ø> (ø)
R/plotMissingValues.R 96.29% <50.00%> (-3.71%) :arrow_down:
R/checkArgumentsMaxQuant.R 100.00% <100.00%> (ø)
R/checkArgumentsPDTMT.R 100.00% <100.00%> (ø)
R/checkArgumentsPDTMTptm.R 100.00% <100.00%> (ø)
R/doFilter.R 100.00% <100.00%> (ø)
... and 13 more

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