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fmicompbio / monaLisa

binned motif enrichment analysis and visualisation
https://fmicompbio.github.io/monaLisa/
GNU General Public License v3.0
36 stars 6 forks source link

Kmers to motifs #47

Closed mbstadler closed 3 years ago

codecov[bot] commented 3 years ago

Codecov Report

Merging #47 (ff68031) into master (ffe957b) will decrease coverage by 1.38%. The diff coverage is 95.50%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master      #47      +/-   ##
==========================================
- Coverage   99.51%   98.13%   -1.39%     
==========================================
  Files          13       14       +1     
  Lines        2071     2515     +444     
==========================================
+ Hits         2061     2468     +407     
- Misses         10       47      +37
Impacted Files Coverage Δ
R/plotting.R 100.00% <ø> (ø)
R/seqlogo.R 100.00% <ø> (ø)
R/motif_enrichment_kmers.R 92.62% <89.08%> (-6.32%) :arrow_down:
R/plotBinDiagnostics.R 97.43% <97.43%> (ø)
src/countKmerPairs.cpp 98.98% <98.46%> (+0.21%) :arrow_up:
R/binning.R 100.00% <100.00%> (ø)
R/motif_enrichment_HOMER.R 99.63% <100.00%> (+0.02%) :arrow_up:
R/motif_enrichment_monaLisa.R 100.00% <100.00%> (ø)
R/pfm_comparison.R 99.27% <100.00%> (+0.09%) :arrow_up:
R/stability_selection.R 100.00% <100.00%> (ø)
... and 4 more

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