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foerstner-lab / READemption

A pipeline for the computational evaluation of RNA-Seq data
https://reademption.readthedocs.io
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Error in vizual align with paired end libraries #21

Closed elhossary closed 1 year ago

elhossary commented 4 years ago

Traceback (most recent call last): File "/usr/local/bin/reademption", line 327, in main() File "/usr/local/bin/reademption", line 291, in main args.func(controller) File "/usr/local/bin/reademption", line 317, in viz_align 1 controller.viz_align() File "/usr/local/lib/python3.5/dist-packages/reademptionlib/controller.py", line 782, in viz_align self._paths.viz_align_input_read_length_plot_path) File "/usr/local/lib/python3.5/dist-packages/reademptionlib/vizalign.py", line 30, in plot_input_read_length plot_path) File "/usr/local/lib/python3.5/dist-packages/reademptionlib/vizalign.py", line 41, in _plot_read_lengths lengths_and_freqs = self._read_processing_stats[lib][dict_key] KeyError: 'Ecoli_LB_20_R1_p1'