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foerstner-lab / READemption

A pipeline for the computational evaluation of RNA-Seq data
https://reademption.readthedocs.io
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Advantage/disadvantage of build_fragments #60

Open termithorbor opened 6 months ago

termithorbor commented 6 months ago

Hi,

what are the advantages/disadvantages of using the build_fragments option for paired-end data beside being very time consuming? From my understanding it makes the analysis more precise but to what extent?

Thanks in advance.