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forensicgenomics / mitoTree-viewer

mitoTree is an interactive tool for visualizing and exploring mitochondrial DNA (mtDNA) lineages and their evolutionary relationships, helping users explore genetic diversity and maternal ancestry.
Mozilla Public License 2.0
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missing country information #9

Closed niki0211 closed 3 weeks ago

niki0211 commented 3 weeks ago

the country for OR182493.1 is listed as NA, but I seen in its Genbank entry: "/note="ethnicity:Ashkenazi; origin_locality:Hungary:Tiszaszentimre".

niki0211 commented 3 weeks ago

This is due to the fact that we are retrieving the country information from the NCBI FEATURE '/origin'. (see documentation).

Adapt the logic to retrieve origin information also from NCBI FEATURE "/note" "origin_locality"

minimops commented 3 weeks ago

We will attempt to incorporate this into the new data pipeline.

minimops commented 3 weeks ago

moved to issue #10