Closed keremw closed 4 years ago
Thank you for your interest. The ref.driver_genes
table is a table with the genes listed in figure 3. The columns has_cnv
and has_mut
indicate whether they should be included in the list of mutations, list of copy number changes or both.
Floris
Hi, Thank you for your great work. I've tried to download the tables from Synapse and apply the code in F1-F3-GLASS-heatmap.R heatmap_snv.sql on them. When I try the patch of ref. is missing from the tables. Specifically there seems to be a column named has_mut that is not present in any of the Synapse tables. Where can I find this column? Thank you in advance, Kerem