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fpbarthel / GLASS

GLASS consortium
MIT License
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Structural variant calls? #158

Closed sdalin closed 1 year ago

sdalin commented 1 year ago

Do structural variant calls exist for the GLASS dataset? Is the WGS deep enough for good quality SV calls? If there are not SV calls, could an SV caller like SvABA be run on the BAMs? We would be happy to collaborate to do this.

fpbarthel commented 1 year ago

Hi @sdalin, I would suggest placing your question at the Synapse page: https://www.synapse.org/#!Synapse:syn17038081/discussion/default

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