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fractal-analytics-platform / fractal-tasks-core

Main tasks for the Fractal analytics platform
https://fractal-analytics-platform.github.io/fractal-tasks-core/
BSD 3-Clause "New" or "Revised" License
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[auto] Update dependencies in `poetry.lock` #717

Closed tcompa closed 2 months ago

tcompa commented 2 months ago

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 2 updates, 0 removals

  • Updating exceptiongroup (1.2.0 -> 1.2.1)
  • Updating dask (2024.4.1 -> 2024.4.2)

Writing lock file

Outdated dependencies before PR:

cellpose                   (!) 2.2.3      3.0.7     anatomical segmentation ...
dask                           2024.4.1   2024.4.2  Parallel PyData with Tas...
docstring-parser               0.15       0.16      Parse Python docstrings ...
docutils                   (!) 0.20.1     0.21.1    Docutils -- Python Docum...
exceptiongroup                 1.2.0      1.2.1     Backport of PEP 654 (exc...
executing                  (!) 0.10.0     2.0.1     Get the currently execut...
imageio                    (!) 2.34.0     2.34.1    Library for reading and ...
in-n-out                   (!) 0.2.0      0.2.1     plugable dependency inje...
ipython                    (!) 8.18.1     8.23.0    IPython: Productive Inte...
jupyterlab-server          (!) 2.26.0     2.27.0    A set of server componen...
lxml                           4.9.4      5.2.1     Powerful and Pythonic XM...
napari-skimage-regionprops (!) 0.8.2      0.10.1    A regionprops table widg...
networkx                   (!) 3.2.1      3.3       Python package for creat...
notebook                   (!) 7.1.2      7.1.3     Jupyter Notebook - A web...
nvidia-cublas-cu11         (!) 11.10.3.66 11.11.3.6 CUBLAS native runtime li...
nvidia-cuda-cupti-cu11     (!) 11.7.101   11.8.87   CUDA profiling tools run...
nvidia-cuda-nvrtc-cu11     (!) 11.7.99    11.8.89   NVRTC native runtime lib...
nvidia-cuda-runtime-cu11   (!) 11.7.99    11.8.89   CUDA Runtime native Libr...
nvidia-cudnn-cu11          (!) 8.5.0.96   9.1.0.70  cuDNN runtime libraries
nvidia-curand-cu11         (!) 10.2.10.91 10.3.0.86 CURAND native runtime li...
nvidia-cusolver-cu11       (!) 11.4.0.1   11.4.1.48 CUDA solver native runti...
nvidia-cusparse-cu11       (!) 11.7.4.91  11.7.5.86 CUSPARSE native runtime ...
nvidia-nccl-cu11           (!) 2.14.3     2.21.5    NVIDIA Collective Commun...
nvidia-nvtx-cu11           (!) 11.7.91    11.8.86   NVIDIA Tools Extension
pandas                         1.5.3      2.2.2     Powerful data structures...
pooch                      (!) 1.8.0      1.8.1     "Pooch manages your Pyth...
pydantic                       1.10.15    2.7.0     Data validation and sett...
pyzmq                      (!) 26.0.0     26.0.2    Python bindings for 0MQ
scikit-image               (!) 0.22.0     0.23.2    Image processing in Python
sphinx                     (!) 7.2.6      7.3.7     Python documentation gen...
stack-data                 (!) 0.5.1      0.6.3     Extract data from python...
tifffile                   (!) 2024.2.12  2024.4.18 Read and write TIFF files
torch                      (!) 2.0.0      2.2.2     Tensors and Dynamic neur...
traitlets                  (!) 5.14.2     5.14.3    Traitlets Python configu...
triton                     (!) 2.0.0      2.3.0     A language and compiler ...

Outdated dependencies after PR:

cellpose                   (!) 2.2.3      3.0.7     anatomical segmentation ...
docstring-parser               0.15       0.16      Parse Python docstrings ...
executing                  (!) 0.10.0     2.0.1     Get the currently execut...
ipython                    (!) 8.18.1     8.23.0    IPython: Productive Inte...
lxml                           4.9.4      5.2.1     Powerful and Pythonic XM...
napari-skimage-regionprops (!) 0.8.2      0.10.1    A regionprops table widg...
networkx                   (!) 3.2.1      3.3       Python package for creat...
nvidia-cublas-cu11         (!) 11.10.3.66 11.11.3.6 CUBLAS native runtime li...
nvidia-cuda-cupti-cu11     (!) 11.7.101   11.8.87   CUDA profiling tools run...
nvidia-cuda-nvrtc-cu11     (!) 11.7.99    11.8.89   NVRTC native runtime lib...
nvidia-cuda-runtime-cu11   (!) 11.7.99    11.8.89   CUDA Runtime native Libr...
nvidia-cudnn-cu11          (!) 8.5.0.96   9.1.0.70  cuDNN runtime libraries
nvidia-curand-cu11         (!) 10.2.10.91 10.3.0.86 CURAND native runtime li...
nvidia-cusolver-cu11       (!) 11.4.0.1   11.4.1.48 CUDA solver native runti...
nvidia-cusparse-cu11       (!) 11.7.4.91  11.7.5.86 CUSPARSE native runtime ...
nvidia-nccl-cu11           (!) 2.14.3     2.21.5    NVIDIA Collective Commun...
nvidia-nvtx-cu11           (!) 11.7.91    11.8.86   NVIDIA Tools Extension
pandas                         1.5.3      2.2.2     Powerful data structures...
pooch                      (!) 1.8.0      1.8.1     "Pooch manages your Pyth...
pydantic                       1.10.15    2.7.0     Data validation and sett...
scikit-image               (!) 0.22.0     0.23.2    Image processing in Python
stack-data                 (!) 0.5.1      0.6.3     Extract data from python...
torch                      (!) 2.0.0      2.2.2     Tensors and Dynamic neur...
triton                     (!) 2.0.0      2.3.0     A language and compiler ...

Note: there may be dependencies in the table above which were not updated as part of this PR. The reason is they require manual updating due to the way they are pinned.

github-actions[bot] commented 2 months ago

Coverage report

This PR does not seem to contain any modification to coverable code.